RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 PANK3Q9H999 370 aa9.44□□□□□ -0.9
HCG20-208ENST00000439406 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
HCG20-208ENST00000439406 DDX41Q9UJV9 622 aaKnown RBP9.44□□□□□ -0.9
HCG20-208ENST00000439406 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
HCG20-208ENST00000439406 UBR2Q8IWV8 1755 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 LTBP1Q14766 1721 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 PPP1R12AO14974 1030 aaPredicted RBP9.43□□□□□ -0.9
HCG20-208ENST00000439406 EIF3JO75822 258 aaKnown RBP9.43□□□□□ -0.9
HCG20-208ENST00000439406 HOXA10P31260 410 aaPredicted RBP9.43□□□□□ -0.9
HCG20-208ENST00000439406 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 PKN2Q16513 984 aaKnown RBP9.43□□□□□ -0.9
HCG20-208ENST00000439406 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 NBPF15Q8N660 670 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
HCG20-208ENST00000439406 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
HCG20-208ENST00000439406 NIP7Q9Y221 180 aaKnown RBP eCLIP9.43□□□□□ -0.9
HCG20-208ENST00000439406 SCN7AQ01118 1682 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 GNAT3A8MTJ3 354 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
HCG20-208ENST00000439406 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
HCG20-208ENST00000439406 ENPP3O14638 875 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 S100BP04271 92 aaPredicted RBP9.42□□□□□ -0.9
HCG20-208ENST00000439406 HMOX1P09601 288 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 SOX10P56693 466 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 IRX6P78412 446 aaPredicted RBP9.42□□□□□ -0.9
HCG20-208ENST00000439406 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 NIM1KQ8IY84 436 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 CKAP2LQ8IYA6 745 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 IL17REQ8NFR9 667 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 NYXQ9GZU5 481 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
HCG20-208ENST00000439406 USP16Q9Y5T5 823 aa9.42□□□□□ -0.9
HCG20-208ENST00000439406 SNED1Q8TER0 1413 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 CDHR2Q9BYE9 1310 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 CCER2I3L3R5 266 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 FGRP09769 529 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 MPSTP25325 297 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 AAMPQ13685 434 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 SWT1Q5T5J6 900 aaKnown RBP9.41□□□□□ -0.9
HCG20-208ENST00000439406 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
HCG20-208ENST00000439406 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 CRAMP1Q96RY5 1269 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 GLIS2Q9BZE0 524 aaPredicted RBP9.41□□□□□ -0.9
HCG20-208ENST00000439406 RNF186Q9NXI6 227 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 ZNRF3Q9ULT6 936 aa9.41□□□□□ -0.9
HCG20-208ENST00000439406 BTBD11A6QL63 1104 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 ATMINO43313 823 aaPredicted RBP9.4□□□□□ -0.9
HCG20-208ENST00000439406 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
HCG20-208ENST00000439406 SNRPA1P09661 255 aaKnown RBP9.4□□□□□ -0.9
HCG20-208ENST00000439406 CLCN6P51797 869 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 HUNKP57058 714 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 CXCL9Q07325 125 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 TNIP1Q15025 636 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 Q3C1V9 767 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 ALG1LQ6GMV1 187 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 RGMBQ6NW40 437 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 RPGRQ92834 1020 aaKnown RBP9.4□□□□□ -0.9
HCG20-208ENST00000439406 RBM17Q96I25 401 aaKnown RBP9.4□□□□□ -0.9
HCG20-208ENST00000439406 G3BP2Q9UN86 482 aaKnown RBP9.4□□□□□ -0.9
HCG20-208ENST00000439406 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 PCDHGB7Q9Y5F8 929 aa9.4□□□□□ -0.9
HCG20-208ENST00000439406 FAM155AB1AL88 458 aaPredicted RBP9.39□□□□□ -0.91
HCG20-208ENST00000439406 H7C1D1 291 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 U2SURPO15042 1029 aaKnown RBP9.39□□□□□ -0.91
HCG20-208ENST00000439406 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 DIAPH1O60610 1272 aaKnown RBP9.39□□□□□ -0.91
HCG20-208ENST00000439406 TRPA1O75762 1119 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 SEC24BO95487 1268 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 RACK1P63244 317 aaKnown RBP9.39□□□□□ -0.91
HCG20-208ENST00000439406 KIF23Q02241 960 aaPredicted RBP9.39□□□□□ -0.91
HCG20-208ENST00000439406 C2orf69Q8N8R5 385 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 CRELD1Q96HD1 420 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 ZIC5Q96T25 663 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 DDX56Q9NY93 547 aaKnown RBP9.39□□□□□ -0.91
HCG20-208ENST00000439406 PRKAB1Q9Y478 270 aa9.39□□□□□ -0.91
HCG20-208ENST00000439406 NPC1L1Q9UHC9 1359 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 PTPREP23469 700 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 GNA15P30679 374 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 GMPSP49915 693 aaPredicted RBP9.38□□□□□ -0.91
HCG20-208ENST00000439406 HIRAP54198 1017 aaPredicted RBP9.38□□□□□ -0.91
HCG20-208ENST00000439406 ALKBH2Q6NS38 261 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 CCDC146Q8IYE0 955 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 PMM1Q92871 262 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 GPKOWQ92917 476 aaPredicted RBP eCLIP9.38□□□□□ -0.91
HCG20-208ENST00000439406 MKL1Q969V6 931 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
HCG20-208ENST00000439406 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
HCG20-208ENST00000439406 TMX1Q9H3N1 280 aa9.38□□□□□ -0.91
HCG20-208ENST00000439406 MAP10Q9P2G4 905 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms