RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
NEK1-201ENST00000439128 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 PCDHB15Q9Y5E8 787 aa13.68□□□□□ -0.22
NEK1-201ENST00000439128 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 ICA1Q05084 483 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 MASTLQ96GX5 879 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 FAM193BQ96PV7 902 aaPredicted RBP13.67□□□□□ -0.22
NEK1-201ENST00000439128 DCTPP1Q9H773 170 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 LEMD3Q9Y2U8 911 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 JCADQ9P266 1359 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 PZPP20742 1482 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 RAD50Q92878 1312 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 BIRC2Q13490 618 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
NEK1-201ENST00000439128 HAUS3Q68CZ6 603 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 ZSCAN12O43309 604 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 TXKP42681 527 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 CCDC91Q7Z6B0 441 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 GOLGA1Q92805 767 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 TSNARE1Q96NA8 513 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 GREM2Q9H772 168 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 21.2
NEK1-201ENST00000439128 SPATA31A3Q5VYP0 1347 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
NEK1-201ENST00000439128 ADGRL3Q9HAR2 1447 aa13.67□□□□□ -0.22
NEK1-201ENST00000439128 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 HSP90AA4PQ58FG1 418 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 AP5M1Q9H0R1 490 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 ARL1P40616 181 aaPredicted RBP13.66□□□□□ -0.22
NEK1-201ENST00000439128 CCDC65Q8IXS2 484 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 ARID5AQ03989 594 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
NEK1-201ENST00000439128 PIGBQ92521 554 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
NEK1-201ENST00000439128 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
NEK1-201ENST00000439128 LRRC47Q8N1G4 583 aaKnown RBP13.66□□□□□ -0.22
NEK1-201ENST00000439128 KRT5P13647 590 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 ZCCHC11Q5TAX3 1644 aaKnown RBP13.65□□□□□ -0.22
NEK1-201ENST00000439128 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.22
NEK1-201ENST00000439128 USP17L12C9JPN9 530 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 USP17L21D6R901 530 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 AKR1B10O60218 316 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 ANO3Q9BYT9 981 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 TMC6Q7Z403 805 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 EXOC7Q9UPT5 735 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 ZEB2O60315 1214 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 MCM4P33991 863 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
NEK1-201ENST00000439128 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
NEK1-201ENST00000439128 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 H0YHG0 523 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 DEXIO95424 95 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 IGBP1P78318 339 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 PPARAQ07869 468 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
NEK1-201ENST00000439128 CASQ1P31415 396 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 KRT19P08727 400 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 SMC1AQ14683 1233 aaKnown RBP13.64□□□□□ -0.23
NEK1-201ENST00000439128 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
NEK1-201ENST00000439128 GIGYF2Q6Y7W6 1299 aaKnown RBP13.64□□□□□ -0.23
NEK1-201ENST00000439128 DYDC1Q8WWB3 177 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
NEK1-201ENST00000439128 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
NEK1-201ENST00000439128 USP17L3A6NCW0 530 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 USP17L4A6NCW7 530 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 SPTLC2O15270 562 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 USP14P54578 494 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 USP17L1Q7RTZ2 530 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
NEK1-201ENST00000439128 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
NEK1-201ENST00000439128 ERBB3P21860 1342 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
NEK1-201ENST00000439128 MIGA2Q7L4E1 593 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 SDR42E1Q8WUS8 393 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 RPL13P26373 211 aaKnown RBP13.63□□□□□ -0.23
NEK1-201ENST00000439128 IFFO1Q0D2I5 559 aa13.63□□□□□ -0.23
NEK1-201ENST00000439128 IFI16Q16666 785 aaKnown RBP13.63□□□□□ -0.23
NEK1-201ENST00000439128 TXNRD1Q16881 649 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms