RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SAMM50Q9Y512 469 aa6.01□□□□□ -1.45
HMGB3P12-201ENST00000438745 FBXO24O75426 580 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 FOSL1P15407 271 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 ERCC3P19447 782 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 EIF4BP23588 611 aaKnown RBP6□□□□□ -1.45
HMGB3P12-201ENST00000438745 HOXA10P31260 410 aaPredicted RBP6□□□□□ -1.45
HMGB3P12-201ENST00000438745 GRIK1P39086 918 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 LCE3BQ5TA77 95 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 OGFOD3Q6PK18 319 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 FBXL6Q8N531 539 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 METTL22Q9BUU2 404 aaPredicted RBP6□□□□□ -1.45
HMGB3P12-201ENST00000438745 GZF1Q9H116 711 aaPredicted RBP6□□□□□ -1.45
HMGB3P12-201ENST00000438745 PCMTD2Q9NV79 361 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 PARP2Q9UGN5 583 aa6□□□□□ -1.45
HMGB3P12-201ENST00000438745 CELA3AP09093 270 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 RAB6AP20340 208 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 TTLL4Q14679 1199 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 LRRC14Q15048 493 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 MSMPQ1L6U9 139 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 SMYD4Q8IYR2 804 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 RNF214Q8ND24 703 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 LEMD3Q9Y2U8 911 aa5.99□□□□□ -1.45
HMGB3P12-201ENST00000438745 FAM170BA6NMN3 283 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 ADAMTS4O75173 837 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 NEFMP07197 916 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 CYP27A1Q02318 531 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 TMC4Q7Z404 712 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 OSBPL1AQ9BXW6 950 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 PCOLCE2Q9UKZ9 415 aa5.98□□□□□ -1.45
HMGB3P12-201ENST00000438745 USP31Q70CQ4 1352 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 NTF4P34130 210 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 CCDC27Q2M243 656 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 DUSP27Q5VZP5 1158 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 PCNX4Q63HM2 1172 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 LLGL2Q6P1M3 1020 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 DAGLAQ9Y4D2 1042 aa5.97□□□□□ -1.45
HMGB3P12-201ENST00000438745 PRNPP04156 253 aa5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 CTSHP09668 335 aa5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 HCLS1P14317 486 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 RPS26P62854 115 aaKnown RBP5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 PTPN11Q06124 597 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 ZNF765Q7L2R6 523 aa5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 ISL2Q96A47 359 aa5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 PIDD1Q9HB75 910 aa5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 TTF2Q9UNY4 1162 aaKnown RBP5.96□□□□□ -1.46
HMGB3P12-201ENST00000438745 FANCGO15287 622 aa5.95□□□□□ -1.46
HMGB3P12-201ENST00000438745 CYP26A1O43174 497 aa5.95□□□□□ -1.46
HMGB3P12-201ENST00000438745 ST13P50502 369 aaKnown RBP5.95□□□□□ -1.46
HMGB3P12-201ENST00000438745 TAGLNQ01995 201 aaKnown RBP5.95□□□□□ -1.46
HMGB3P12-201ENST00000438745 GAL3ST3Q96A11 431 aa5.95□□□□□ -1.46
HMGB3P12-201ENST00000438745 LGR6Q9HBX8 967 aa5.95□□□□□ -1.46
HMGB3P12-201ENST00000438745 DCDC2CA8MYV0 355 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 RNGTTO60942 597 aaKnown RBP5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 WNT11O96014 354 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 PSMD2Q13200 908 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 INPP5AQ14642 412 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 TAF1CQ15572 869 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 CYP27C1Q4G0S4 372 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 PPM1JQ5JR12 505 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 MEI1Q5TIA1 1274 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 TTBK2Q6IQ55 1244 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 NFXL1Q6ZNB6 911 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 AGMOQ6ZNB7 445 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 CYFIP1Q7L576 1253 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 FAM214BQ7L5A3 538 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 C12orf40Q86WS4 652 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 ACSBG1Q96GR2 724 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 NOC4LQ9BVI4 516 aaKnown RBP5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 PCDHA4Q9UN74 947 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 SNCAIPQ9Y6H5 919 aa5.94□□□□□ -1.46
HMGB3P12-201ENST00000438745 GP2P55259 537 aaKnown RBP5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 XPCQ01831 940 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 CDK5R2Q13319 367 aa5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 CCDC85BQ15834 202 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 ZBTB37Q5TC79 503 aa5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 DUSP23Q9BVJ7 150 aa5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 CCDC39Q9UFE4 941 aa5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 ZC3H7BQ9UGR2 993 aaKnown RBP5.93□□□□□ -1.46
HMGB3P12-201ENST00000438745 GFRA2O00451 464 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 LIG3P49916 1009 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 MCTP1Q6DN14 999 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 LRFN4Q6PJG9 635 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 FAM161BQ96MY7 647 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 MKNK2Q9HBH9 465 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 PCDHB5Q9Y5E4 795 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 CSADQ9Y600 493 aa5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 OAS3Q9Y6K5 1087 aaKnown RBP5.92□□□□□ -1.46
HMGB3P12-201ENST00000438745 SORBS3O60504 671 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 LEFTY1O75610 366 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 FAM87AP0C7U9 286 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 RLBP1P12271 317 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 CAP2P40123 477 aa5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 TRIM26Q12899 539 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P12-201ENST00000438745 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms