RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GAL3ST3Q96A11 431 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 ELMO3Q96BJ8 720 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 YIPF2Q9BWQ6 316 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 ATXN3LQ9H3M9 355 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 INPP5FQ9Y2H2 1132 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 FAM221AA4D161 298 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 C1QTNF9BB2RNN3 333 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 GAS2O43903 313 aaKnown RBP6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 TIAF1O95411 115 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 F13A1P00488 732 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 ADH5P11766 374 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 GARTP22102 1010 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 USP11P51784 963 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 CWF19L2Q2TBE0 894 aaKnown RBP6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 BNC2Q6ZN30 1099 aaPredicted RBP6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 AGGF1Q8N302 714 aaeCLIP6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 WDR89Q96FK6 387 aaPredicted RBP6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 C8orf37Q96NL8 207 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 LRRC3Q9BY71 257 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 PICK1Q9NRD5 415 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 CRIM1Q9NZV1 1036 aa6.07□□□□□ -1.44
LSM1P1-201ENST00000438629 GATA4P43694 442 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 PTPN11Q06124 597 aaPredicted RBP6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 PDE4BQ07343 736 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 APOBRQ0VD83 1088 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 PAK2Q13177 524 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 MPRIPQ6WCQ1 1025 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 DYMQ7RTS9 669 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 DZIP1LQ8IYY4 767 aaKnown RBP6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 SLC43A3Q8NBI5 491 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 KCT2Q8NC54 265 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 NKD1Q969G9 470 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 GPRASP2Q96D09 838 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 ACBD3Q9H3P7 528 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 CAPN10Q9HC96 672 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 HIF3AQ9Y2N7 669 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 PCDHGC5Q9Y5F6 944 aa6.06□□□□□ -1.44
LSM1P1-201ENST00000438629 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 FANCGO15287 622 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 TMPRSS2O15393 492 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 DRD2P14416 443 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 ASPAP45381 313 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 GJA8P48165 433 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 ZNF165P49910 485 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 MLECQ14165 292 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 WIPI1Q5MNZ9 446 aaPredicted RBP6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 CYFIP1Q7L576 1253 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 SLITRK4Q8IW52 837 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 REXO1Q8N1G1 1221 aaKnown RBP6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 RNF214Q8ND24 703 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 RASGRP4Q8TDF6 673 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 FAM46AQ96IP4 442 aaKnown RBP6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 EAF1Q96JC9 268 aaPredicted RBP6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 GSX1Q9H4S2 264 aaPredicted RBP6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 PIDD1Q9HB75 910 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
LSM1P1-201ENST00000438629 DCDC2CA8MYV0 355 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 GFRA2O00451 464 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 DHX15O43143 795 aaKnown RBP6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 CHRNA4P43681 627 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 INPP5AQ14642 412 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 LRFN4Q6PJG9 635 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 CDC37L1Q7L3B6 337 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 REC114Q7Z4M0 266 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 C12orf40Q86WS4 652 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 C2CD4AQ8NCU7 369 aaPredicted RBP6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 ZNF507Q8TCN5 953 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 UTP4Q969X6 686 aaKnown RBP6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 PLPPR2Q96GM1 343 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 SEC16BQ96JE7 1060 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 FANCD2OSQ96PS1 177 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 UBL7Q96S82 380 aaPredicted RBP6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 DISC1Q9NRI5 854 aa6.04□□□□□ -1.44
LSM1P1-201ENST00000438629 TLR3O15455 904 aaKnown RBP6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 PREPP48147 710 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 GSK3AP49840 483 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 RING1Q06587 406 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 SEZ6Q53EL9 994 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 NAALADL2Q58DX5 795 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 WNT10AQ9GZT5 417 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 SSU72Q9NP77 194 aaKnown RBP6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 UBP1Q9NZI7 540 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 PCOLCE2Q9UKZ9 415 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 CSADQ9Y600 493 aa6.03□□□□□ -1.44
LSM1P1-201ENST00000438629 RNGTTO60942 597 aaKnown RBP6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 IMPDH2P12268 514 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 BMP3P12645 472 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 MCM4P33991 863 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 ETF1P62495 437 aaKnown RBP6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 ARID5AQ03989 594 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 MAP7Q14244 749 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 ZBTB37Q5TC79 503 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 SMYD4Q8IYR2 804 aaPredicted RBP6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 MEGF10Q96KG7 1140 aa6.02□□□□□ -1.45
LSM1P1-201ENST00000438629 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms