RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 PICK1Q9NRD5 415 aa10.92□□□□□ -0.66
SCRN1-208ENST00000438497 SLC45A1Q9Y2W3 748 aa10.92□□□□□ -0.66
SCRN1-208ENST00000438497 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
SCRN1-208ENST00000438497 MROH5Q6ZUA9 1318 aa10.91□□□□□ -0.66
SCRN1-208ENST00000438497 BEND3Q5T5X7 828 aa10.91□□□□□ -0.66
SCRN1-208ENST00000438497 CDC42EP5Q6NZY7 148 aa10.91□□□□□ -0.66
SCRN1-208ENST00000438497 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
SCRN1-208ENST00000438497 GUCD1Q96NT3 240 aa10.91□□□□□ -0.66
SCRN1-208ENST00000438497 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
SCRN1-208ENST00000438497 AFG3L2Q9Y4W6 797 aa10.91□□□□□ -0.66
SCRN1-208ENST00000438497 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.66
SCRN1-208ENST00000438497 F6X3S4 739 aa10.9□□□□□ -0.66
SCRN1-208ENST00000438497 HMGCRP04035 888 aa10.9□□□□□ -0.66
SCRN1-208ENST00000438497 PTPRAP18433 802 aa10.9□□□□□ -0.66
SCRN1-208ENST00000438497 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
SCRN1-208ENST00000438497 SCYL3Q8IZE3 742 aa10.9□□□□□ -0.66
SCRN1-208ENST00000438497 USP40Q9NVE5 1235 aa10.9□□□□□ -0.66
SCRN1-208ENST00000438497 OGDHLQ9ULD0 1010 aa10.9□□□□□ -0.66
SCRN1-208ENST00000438497 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
SCRN1-208ENST00000438497 UNC80Q8N2C7 3258 aa10.9□□□□□ -0.67
SCRN1-208ENST00000438497 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 GRM8O00222 908 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 NFIAQ12857 509 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 TRIM32Q13049 653 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 ZFPM1Q8IX07 1006 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 GJD2Q9UKL4 321 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 GTF3C3Q9Y5Q9 886 aa10.89□□□□□ -0.67
SCRN1-208ENST00000438497 TRIM75PA6NK02 468 aa10.88□□□□□ -0.67
SCRN1-208ENST00000438497 PDE8BO95263 885 aa10.88□□□□□ -0.67
SCRN1-208ENST00000438497 FAM110CQ1W6H9 321 aa10.88□□□□□ -0.67
SCRN1-208ENST00000438497 ZNF697Q5TEC3 545 aa10.88□□□□□ -0.67
SCRN1-208ENST00000438497 WDR66Q8TBY9 1149 aa10.88□□□□□ -0.67
SCRN1-208ENST00000438497 DAGLAQ9Y4D2 1042 aa10.88□□□□□ -0.67
SCRN1-208ENST00000438497 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
SCRN1-208ENST00000438497 CTNND1O60716 968 aaKnown RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 COL9A1P20849 921 aa10.87□□□□□ -0.67
SCRN1-208ENST00000438497 GCLCP48506 637 aaPredicted RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 DIXDC1Q155Q3 683 aa10.87□□□□□ -0.67
SCRN1-208ENST00000438497 LRRC24Q50LG9 513 aa10.87□□□□□ -0.67
SCRN1-208ENST00000438497 ZSCAN29Q8IWY8 852 aaPredicted RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 CDX2Q99626 313 aaPredicted RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 LBHD1Q9BQE6 289 aaPredicted RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
SCRN1-208ENST00000438497 AGTPBP1Q9UPW5 1226 aa10.87□□□□□ -0.67
SCRN1-208ENST00000438497 DDX60LQ5H9U9 1706 aaKnown RBP10.87□□□□□ -0.67
SCRN1-208ENST00000438497 PFASO15067 1338 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 VAMP4O75379 141 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 IFIT1P09914 478 aaKnown RBP10.86□□□□□ -0.67
SCRN1-208ENST00000438497 CYP2B6P20813 491 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 MAP3K10Q02779 954 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
SCRN1-208ENST00000438497 LRRC26Q2I0M4 334 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 TREML2Q5T2D2 321 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 MAFAQ8NHW3 353 aaPredicted RBP10.86□□□□□ -0.67
SCRN1-208ENST00000438497 SEMA6BQ9H3T3 888 aa10.86□□□□□ -0.67
SCRN1-208ENST00000438497 RNF216Q9NWF9 866 aaPredicted RBP10.86□□□□□ -0.67
SCRN1-208ENST00000438497 ENTPD3O75355 529 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 COL6A1P12109 1028 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 RGS3P49796 1198 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 PABPC4Q13310 644 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCRN1-208ENST00000438497 PROCA1Q8NCQ7 364 aaPredicted RBP10.85□□□□□ -0.67
SCRN1-208ENST00000438497 TRIB2Q92519 343 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 KAZALD1Q96I82 304 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 SUCLG2Q96I99 432 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
SCRN1-208ENST00000438497 LDHBP07195 334 aaKnown RBP10.84□□□□□ -0.67
SCRN1-208ENST00000438497 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
SCRN1-208ENST00000438497 SLURP2P0DP57 97 aa10.84□□□□□ -0.67
SCRN1-208ENST00000438497 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
SCRN1-208ENST00000438497 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
SCRN1-208ENST00000438497 SPP2Q13103 211 aa10.84□□□□□ -0.67
SCRN1-208ENST00000438497 MAP3K21Q5TCX8 1036 aa10.84□□□□□ -0.67
SCRN1-208ENST00000438497 SLC4A10Q6U841 1118 aa10.84□□□□□ -0.67
SCRN1-208ENST00000438497 CCDC84Q86UT8 332 aaPredicted RBP10.84□□□□□ -0.67
SCRN1-208ENST00000438497 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
SCRN1-208ENST00000438497 DDTLA6NHG4 134 aaPredicted RBP10.83□□□□□ -0.68
SCRN1-208ENST00000438497 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
SCRN1-208ENST00000438497 PRDX5P30044 214 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 LHX8Q68G74 356 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 SH3BP5LQ7L8J4 393 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
SCRN1-208ENST00000438497 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 MYLIPQ8WY64 445 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 IDI2Q9BXS1 227 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 SENP6Q9GZR1 1112 aaPredicted RBP10.83□□□□□ -0.68
SCRN1-208ENST00000438497 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.83□□□□□ -0.68
SCRN1-208ENST00000438497 PRKAG2Q9UGJ0 569 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 PTPRFP10586 1907 aa10.83□□□□□ -0.68
SCRN1-208ENST00000438497 XRCC5P13010 732 aaKnown RBP10.82□□□□□ -0.68
SCRN1-208ENST00000438497 SLC5A1P13866 664 aa10.82□□□□□ -0.68
SCRN1-208ENST00000438497 FGFR2P21802 821 aa10.82□□□□□ -0.68
SCRN1-208ENST00000438497 PUM3Q15397 648 aaKnown RBP10.82□□□□□ -0.68
SCRN1-208ENST00000438497 CCDC27Q2M243 656 aa10.82□□□□□ -0.68
SCRN1-208ENST00000438497 KLHDC4Q8TBB5 520 aa10.82□□□□□ -0.68
SCRN1-208ENST00000438497 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms