RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 ZNF396Q96N95 335 aaPredicted RBP12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 GPR101Q96P66 508 aaPredicted RBP12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
ERGIC3-207ENST00000438317 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 TNRC18O15417 2968 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 NPHP1O15259 732 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 JAK2O60674 1132 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 PDE6AP16499 860 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 PHKA1P46020 1223 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 RESTQ13127 1097 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 TTLL5Q6EMB2 1281 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 PIH1D3Q9NQM4 214 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 TSKSQ9UJT2 592 aa12.92□□□□□ -0.34
ERGIC3-207ENST00000438317 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 PRC1O43663 620 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 IDH1O75874 414 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 ECE1P42892 770 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 LEO1Q8WVC0 666 aaPredicted RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 MCOLN1Q9GZU1 580 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 COL4A5P29400 1685 aa12.91□□□□□ -0.34
ERGIC3-207ENST00000438317 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 FOXP2O15409 715 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 AOC2O75106 756 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 CTDNEP1O95476 244 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 APPP05067 770 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 UBE4AQ14139 1066 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 TMEM87BQ96K49 555 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 MTA3Q9BTC8 594 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 RCOR1Q9UKL0 485 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 TLL2Q9Y6L7 1015 aa12.9□□□□□ -0.34
ERGIC3-207ENST00000438317 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 TRAF5O00463 557 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 MAP2K2P36507 400 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 EPS15P42566 896 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 SCNN1DP51172 638 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 GRM1Q13255 1194 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 PI16Q6UXB8 463 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 PSMD1Q99460 953 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 SEC31BQ9NQW1 1179 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 CCDC39Q9UFE4 941 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
ERGIC3-207ENST00000438317 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 ZBTB22O15209 634 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 IGSF3O75054 1194 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 CDKL5O76039 1030 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 CAVIN2O95810 425 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 HAND2P61296 217 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 CHRNDQ07001 517 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 TMED8Q6PL24 325 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 FUCA2Q9BTY2 467 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 KRT23Q9C075 422 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 NUP62CLQ9H1M0 184 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 GJA3Q9Y6H8 435 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 CASP8AP2Q9UKL3 1982 aa12.88□□□□□ -0.35
ERGIC3-207ENST00000438317 CPLX1O14810 134 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 CTAGE5O15320 804 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 RASGRF1Q13972 1273 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 JDP2Q8WYK2 163 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
ERGIC3-207ENST00000438317 SEMA3EO15041 775 aa12.86□□□□□ -0.35
ERGIC3-207ENST00000438317 MSNP26038 577 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms