RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 RSBN1LQ6PCB5 846 aaPredicted RBP11.63□□□□□ -0.55
CUBN-204ENST00000438254 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
CUBN-204ENST00000438254 LCORLQ8N3X6 602 aa11.63□□□□□ -0.55
CUBN-204ENST00000438254 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
CUBN-204ENST00000438254 PALD1Q9ULE6 856 aa11.63□□□□□ -0.55
CUBN-204ENST00000438254 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
CUBN-204ENST00000438254 ADAMTSL1Q8N6G6 1762 aa11.63□□□□□ -0.55
CUBN-204ENST00000438254 MYO3BQ8WXR4 1341 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 GSG1L2A8MUP6 293 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 RAD17O75943 681 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 LMNB1P20700 586 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 RHBDL3P58872 404 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 DYNLL1P63167 89 aaKnown RBP11.62□□□□□ -0.55
CUBN-204ENST00000438254 GSTO1P78417 241 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 ALX1Q15699 326 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 HHIPL2Q6UWX4 724 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 KIAA1211Q6ZU35 1233 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 MIGA1Q8NAN2 632 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 ARMT1Q9H993 441 aa11.62□□□□□ -0.55
CUBN-204ENST00000438254 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
CUBN-204ENST00000438254 EPB41L4AQ9HCS5 686 aaPredicted RBP11.62□□□□□ -0.55
CUBN-204ENST00000438254 MKRN1Q9UHC7 482 aaKnown RBP11.62□□□□□ -0.55
CUBN-204ENST00000438254 RBM19Q9Y4C8 960 aaKnown RBP11.62□□□□□ -0.55
CUBN-204ENST00000438254 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
CUBN-204ENST00000438254 DDX60LQ5H9U9 1706 aaKnown RBP11.61□□□□□ -0.55
CUBN-204ENST00000438254 PATL2C9JE40 543 aaKnown RBP11.61□□□□□ -0.55
CUBN-204ENST00000438254 LDHCP07864 332 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 GNAT2P19087 354 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 ANAPC15P60006 121 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 AGBL3Q8NEM8 1001 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 AIDAQ96BJ3 306 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 TTF2Q9UNY4 1162 aaKnown RBP11.61□□□□□ -0.55
CUBN-204ENST00000438254 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
CUBN-204ENST00000438254 LAMA4Q16363 1823 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 CDK5RAP2Q96SN8 1893 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 PRKAB2O43741 272 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 FGAP02671 866 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 CRKP46108 304 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 CREB3L3Q68CJ9 461 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 CIAPIN1Q6FI81 312 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
CUBN-204ENST00000438254 CERS3Q8IU89 383 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 ZDHHC15Q96MV8 337 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 AATFQ9NY61 560 aaKnown RBP eCLIP11.6□□□□□ -0.55
CUBN-204ENST00000438254 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
CUBN-204ENST00000438254 F8W031 263 aaPredicted RBP11.59□□□□□ -0.55
CUBN-204ENST00000438254 SLC27A2O14975 620 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 CYP21A2P08686 494 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 BTDP43251 543 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 GIMAP6Q6P9H5 292 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 IFNL3Q8IZI9 196 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 MTMR14Q8NCE2 650 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 TEKT1Q969V4 418 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 ZBED3Q96IU2 234 aaPredicted RBP11.59□□□□□ -0.55
CUBN-204ENST00000438254 PCDHAC2Q9Y5I4 1007 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
CUBN-204ENST00000438254 BAG3O95817 575 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 RPS12P25398 132 aaKnown RBP11.58□□□□□ -0.56
CUBN-204ENST00000438254 MMP14P50281 582 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 SCNN1DP51172 638 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 ZNF280AP59817 542 aaPredicted RBP11.58□□□□□ -0.56
CUBN-204ENST00000438254 TNIP1Q15025 636 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 ARSIQ5FYB1 569 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 SH3RF3Q8TEJ3 882 aaPredicted RBP11.58□□□□□ -0.56
CUBN-204ENST00000438254 SDR42E1Q8WUS8 393 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 DPF2Q92785 391 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 DCP1AQ9NPI6 582 aaPredicted RBP11.58□□□□□ -0.56
CUBN-204ENST00000438254 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 SLC4A4Q9Y6R1 1079 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 ECM29Q5VYK3 1845 aa11.58□□□□□ -0.56
CUBN-204ENST00000438254 WDHD1O75717 1129 aaPredicted RBP11.57□□□□□ -0.56
CUBN-204ENST00000438254 MCCP23508 829 aa11.57□□□□□ -0.56
CUBN-204ENST00000438254 COL9A3Q14050 684 aaPredicted RBP11.57□□□□□ -0.56
CUBN-204ENST00000438254 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
CUBN-204ENST00000438254 CDC42EP5Q6NZY7 148 aa11.57□□□□□ -0.56
CUBN-204ENST00000438254 STOX1Q6ZVD7 989 aa11.57□□□□□ -0.56
CUBN-204ENST00000438254 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
CUBN-204ENST00000438254 ATP8A2Q9NTI2 1148 aa11.57□□□□□ -0.56
CUBN-204ENST00000438254 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
CUBN-204ENST00000438254 GRIN3BO60391 1043 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 EIF6P56537 245 aaKnown RBP11.56□□□□□ -0.56
CUBN-204ENST00000438254 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 SBK1Q52WX2 424 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 NAV1Q8NEY1 1877 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 TM6SF1Q9BZW5 370 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 ANAPC4Q9UJX5 808 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 TACC3Q9Y6A5 838 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms