RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 RGS3P49796 1198 aa22.84■■□□□ 1.25
UBXN1-203ENST00000436354 PRRT2Q7Z6L0 340 aaPredicted RBP22.84■■□□□ 1.25
UBXN1-203ENST00000436354 U2AF1L4Q8WU68 220 aaKnown RBP22.84■■□□□ 1.25
UBXN1-203ENST00000436354 IDI2Q9BXS1 227 aa22.84■■□□□ 1.25
UBXN1-203ENST00000436354 MYH2Q9UKX2 1941 aa22.83■■□□□ 1.25
UBXN1-203ENST00000436354 PTPRAP18433 802 aa22.83■■□□□ 1.25
UBXN1-203ENST00000436354 ZGPATQ8N5A5 531 aaKnown RBP22.83■■□□□ 1.25
UBXN1-203ENST00000436354 SIL1Q9H173 461 aa22.83■■□□□ 1.25
UBXN1-203ENST00000436354 GABRQQ9UN88 632 aa22.83■■□□□ 1.25
UBXN1-203ENST00000436354 SLC45A1Q9Y2W3 748 aa22.83■■□□□ 1.25
UBXN1-203ENST00000436354 ATRNL1Q5VV63 1379 aa22.83■■□□□ 1.25
UBXN1-203ENST00000436354 ADCY3O60266 1144 aa22.82■■□□□ 1.24
UBXN1-203ENST00000436354 FARP2O94887 1054 aaPredicted RBP22.82■■□□□ 1.24
UBXN1-203ENST00000436354 CAPN2P17655 700 aa22.82■■□□□ 1.24
UBXN1-203ENST00000436354 GADL1Q6ZQY3 521 aa22.82■■□□□ 1.24
UBXN1-203ENST00000436354 ZSCAN29Q8IWY8 852 aaPredicted RBP22.82■■□□□ 1.24
UBXN1-203ENST00000436354 UNC93B1Q9H1C4 597 aa22.82■■□□□ 1.24
UBXN1-203ENST00000436354 AFG3L2Q9Y4W6 797 aa22.82■■□□□ 1.24
UBXN1-203ENST00000436354 LRRFIP2Q9Y608 721 aaKnown RBP22.82■■□□□ 1.24
UBXN1-203ENST00000436354 E9PSI1 815 aa22.81■■□□□ 1.24
UBXN1-203ENST00000436354 ZBTB22O15209 634 aa22.81■■□□□ 1.24
UBXN1-203ENST00000436354 SGPL1O95470 568 aa22.81■■□□□ 1.24
UBXN1-203ENST00000436354 UBTFL1P0CB47 393 aaPredicted RBP22.81■■□□□ 1.24
UBXN1-203ENST00000436354 PHKA1P46020 1223 aa22.81■■□□□ 1.24
UBXN1-203ENST00000436354 MAP3K10Q02779 954 aa22.81■■□□□ 1.24
UBXN1-203ENST00000436354 IL15P40933 162 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-203ENST00000436354 FLT3LGP49771 235 aa22.8■■□□□ 1.24
UBXN1-203ENST00000436354 SLF2Q8IX21 1173 aa22.8■■□□□ 1.24
UBXN1-203ENST00000436354 PXYLP1Q8TE99 480 aa22.8■■□□□ 1.24
UBXN1-203ENST00000436354 SMCR8Q8TEV9 937 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-203ENST00000436354 PTPRFP10586 1907 aa22.8■■□□□ 1.24
UBXN1-203ENST00000436354 GAKO14976 1311 aa22.8■■□□□ 1.24
UBXN1-203ENST00000436354 TNPO2O14787 897 aaKnown RBP22.79■■□□□ 1.24
UBXN1-203ENST00000436354 CTNND1O60716 968 aaKnown RBP22.79■■□□□ 1.24
UBXN1-203ENST00000436354 ALDH1L2Q3SY69 923 aa22.79■■□□□ 1.24
UBXN1-203ENST00000436354 DZIP1Q86YF9 867 aaKnown RBP22.79■■□□□ 1.24
UBXN1-203ENST00000436354 PRO3102Q9H379 93 aa22.79■■□□□ 1.24
UBXN1-203ENST00000436354 DOCK1Q14185 1865 aa22.79■■□□□ 1.24
UBXN1-203ENST00000436354 ZBTB7BO15156 539 aaPredicted RBP22.78■■□□□ 1.24
UBXN1-203ENST00000436354 IRF5Q13568 498 aa22.78■■□□□ 1.24
UBXN1-203ENST00000436354 CCDC102BQ68D86 513 aa22.78■■□□□ 1.24
UBXN1-203ENST00000436354 SH3BP5LQ7L8J4 393 aa22.78■■□□□ 1.24
UBXN1-203ENST00000436354 HDAC5Q9UQL6 1122 aa22.78■■□□□ 1.24
UBXN1-203ENST00000436354 RFX7Q2KHR2 1363 aa22.77■■□□□ 1.24
UBXN1-203ENST00000436354 DDTLA6NHG4 134 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-203ENST00000436354 INHAP05111 366 aa22.77■■□□□ 1.24
UBXN1-203ENST00000436354 ELNP15502 786 aa22.77■■□□□ 1.24
UBXN1-203ENST00000436354 FAM163AQ96GL9 167 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-203ENST00000436354 ABCF2Q9UG63 623 aa22.77■■□□□ 1.24
UBXN1-203ENST00000436354 PHIPQ8WWQ0 1821 aa22.77■■□□□ 1.24
UBXN1-203ENST00000436354 TFRCP02786 760 aaKnown RBP22.76■■□□□ 1.23
UBXN1-203ENST00000436354 SPTY2D1Q68D10 685 aaPredicted RBP22.76■■□□□ 1.23
UBXN1-203ENST00000436354 SMC4Q9NTJ3 1288 aa22.76■■□□□ 1.23
UBXN1-203ENST00000436354 PDS5AQ29RF7 1337 aaKnown RBP22.76■■□□□ 1.23
UBXN1-203ENST00000436354 A0A1W2PPC1 479 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 TRIM75PA6NK02 468 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 EVI5O60447 810 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 ADORA1P30542 326 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 PICALMQ13492 652 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 COA7Q96BR5 231 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 DEFB118Q96PH6 123 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 AGTPBP1Q9UPW5 1226 aa22.75■■□□□ 1.23
UBXN1-203ENST00000436354 BTDP43251 543 aa22.74■■□□□ 1.23
UBXN1-203ENST00000436354 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
UBXN1-203ENST00000436354 SLFN5Q08AF3 891 aa22.74■■□□□ 1.23
UBXN1-203ENST00000436354 RASGRF1Q13972 1273 aa22.74■■□□□ 1.23
UBXN1-203ENST00000436354 COPRSQ9NQ92 184 aa22.74■■□□□ 1.23
UBXN1-203ENST00000436354 DDX4Q9NQI0 724 aaKnown RBP22.74■■□□□ 1.23
UBXN1-203ENST00000436354 PAK6Q9NQU5 681 aaPredicted RBP22.74■■□□□ 1.23
UBXN1-203ENST00000436354 PNMA3Q9UL41 463 aa22.74■■□□□ 1.23
UBXN1-203ENST00000436354 PA2G4Q9UQ80 394 aaKnown RBP22.74■■□□□ 1.23
UBXN1-203ENST00000436354 ANKRD13CQ8N6S4 541 aa22.73■■□□□ 1.23
UBXN1-203ENST00000436354 TAOK2Q9UL54 1235 aa22.73■■□□□ 1.23
UBXN1-203ENST00000436354 MROH7-TTC4A0A0A0MT08 1334 aa22.73■■□□□ 1.23
UBXN1-203ENST00000436354 SZT2Q5T011 3432 aa22.72■■□□□ 1.23
UBXN1-203ENST00000436354 TBC1D12O60347 775 aa22.72■■□□□ 1.23
UBXN1-203ENST00000436354 SLURP2P0DP57 97 aa22.72■■□□□ 1.23
UBXN1-203ENST00000436354 TIMM10P62072 90 aa22.72■■□□□ 1.23
UBXN1-203ENST00000436354 FAM110CQ1W6H9 321 aa22.72■■□□□ 1.23
UBXN1-203ENST00000436354 ZBED9Q6R2W3 1325 aa22.72■■□□□ 1.23
UBXN1-203ENST00000436354 GPR75-ASB3A0A0A6YYF3 556 aa22.71■■□□□ 1.23
UBXN1-203ENST00000436354 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
UBXN1-203ENST00000436354 PROCA1Q8NCQ7 364 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-203ENST00000436354 CRISPLD2Q9H0B8 497 aa22.71■■□□□ 1.23
UBXN1-203ENST00000436354 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-203ENST00000436354 AKAP2Q9Y2D5 859 aa22.71■■□□□ 1.23
UBXN1-203ENST00000436354 MECOMQ03112 1051 aa22.7■■□□□ 1.22
UBXN1-203ENST00000436354 MVPQ14764 893 aaKnown RBP22.7■■□□□ 1.22
UBXN1-203ENST00000436354 TREML2Q5T2D2 321 aa22.7■■□□□ 1.22
UBXN1-203ENST00000436354 ERICH6Q7L0X2 663 aa22.7■■□□□ 1.22
UBXN1-203ENST00000436354 CCDC84Q86UT8 332 aaPredicted RBP22.7■■□□□ 1.22
UBXN1-203ENST00000436354 OSBPL5Q9H0X9 879 aaPredicted RBP22.7■■□□□ 1.22
UBXN1-203ENST00000436354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
UBXN1-203ENST00000436354 DOCK3Q8IZD9 2030 aa22.7■■□□□ 1.22
UBXN1-203ENST00000436354 RANBP2P49792 3224 aaKnown RBP22.69■■□□□ 1.22
UBXN1-203ENST00000436354 MAP4K4O95819 1239 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-203ENST00000436354 GCLCP48506 637 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-203ENST00000436354 RHBDL3P58872 404 aa22.69■■□□□ 1.22
UBXN1-203ENST00000436354 PABPC4Q13310 644 aaKnown RBP eCLIP22.69■■□□□ 1.224e-10■■■■□ 23.7
UBXN1-203ENST00000436354 NECAB2Q7Z6G3 386 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms