RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
HMGN1-207ENST00000436324 NDUFB9Q9Y6M9 179 aa22.4■■□□□ 1.18
HMGN1-207ENST00000436324 GPR25O00155 361 aa22.39■■□□□ 1.17
HMGN1-207ENST00000436324 ALDH1A1P00352 501 aa22.39■■□□□ 1.17
HMGN1-207ENST00000436324 ZNF296Q8WUU4 475 aaPredicted RBP22.39■■□□□ 1.17
HMGN1-207ENST00000436324 KIF1BPQ96EK5 621 aa22.39■■□□□ 1.17
HMGN1-207ENST00000436324 NOL10Q9BSC4 688 aaKnown RBP22.39■■□□□ 1.17
HMGN1-207ENST00000436324 DDTLA6NHG4 134 aaPredicted RBP22.38■■□□□ 1.17
HMGN1-207ENST00000436324 SPDYE5A6NIY4 337 aa22.38■■□□□ 1.17
HMGN1-207ENST00000436324 SLURP2P0DP57 97 aa22.38■■□□□ 1.17
HMGN1-207ENST00000436324 ERO1BQ86YB8 467 aa22.38■■□□□ 1.17
HMGN1-207ENST00000436324 MS4A4AQ96JQ5 239 aa22.38■■□□□ 1.17
HMGN1-207ENST00000436324 PTPN18Q99952 460 aa22.38■■□□□ 1.17
HMGN1-207ENST00000436324 RFX7Q2KHR2 1363 aa22.38■■□□□ 1.17
HMGN1-207ENST00000436324 CCL15-CCL14A0A0B4J2E2 113 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 GTF2A2P52657 109 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 CCL15Q16663 113 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 OTUD7BQ6GQQ9 843 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 TEX11Q8IYF3 940 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 CLASRPQ8N2M8 674 aaKnown RBP22.37■■□□□ 1.17
HMGN1-207ENST00000436324 SH3RF3Q8TEJ3 882 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-207ENST00000436324 AATFQ9NY61 560 aaKnown RBP eCLIP22.37■■□□□ 1.17
HMGN1-207ENST00000436324 ZNF112Q9UJU3 913 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
HMGN1-207ENST00000436324 TESPA1A2RU30 521 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-207ENST00000436324 RAB11FIP3O75154 756 aa22.36■■□□□ 1.17
HMGN1-207ENST00000436324 IDH1O75874 414 aaKnown RBP22.36■■□□□ 1.17
HMGN1-207ENST00000436324 IFIT2P09913 472 aaKnown RBP22.36■■□□□ 1.17
HMGN1-207ENST00000436324 BRI3BPQ8WY22 251 aa22.36■■□□□ 1.17
HMGN1-207ENST00000436324 CCDC85CA6NKD9 419 aa22.35■■□□□ 1.17
HMGN1-207ENST00000436324 IRF6O14896 467 aa22.35■■□□□ 1.17
HMGN1-207ENST00000436324 CTU1Q7Z7A3 348 aaKnown RBP22.35■■□□□ 1.17
HMGN1-207ENST00000436324 ADGRA1Q86SQ6 560 aa22.35■■□□□ 1.17
HMGN1-207ENST00000436324 ANTXR1Q9H6X2 564 aa22.35■■□□□ 1.17
HMGN1-207ENST00000436324 FKTNO75072 461 aa22.34■■□□□ 1.17
HMGN1-207ENST00000436324 BAG3O95817 575 aa22.34■■□□□ 1.17
HMGN1-207ENST00000436324 CYP7A1P22680 504 aa22.34■■□□□ 1.17
HMGN1-207ENST00000436324 PPIL2Q13356 520 aa22.34■■□□□ 1.17
HMGN1-207ENST00000436324 CFHR5Q9BXR6 569 aa22.34■■□□□ 1.17
HMGN1-207ENST00000436324 MAP4K4O95819 1239 aaPredicted RBP22.33■■□□□ 1.17
HMGN1-207ENST00000436324 CRHR2Q13324 411 aa22.33■■□□□ 1.17
HMGN1-207ENST00000436324 ATRNL1Q5VV63 1379 aa22.33■■□□□ 1.17
HMGN1-207ENST00000436324 FAM196BA6NMK8 535 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 PHF20L1A8MW92 1017 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 CETPP11597 493 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 DYNLL1P63167 89 aaKnown RBP22.32■■□□□ 1.16
HMGN1-207ENST00000436324 PPATQ06203 517 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 SNAPC2Q13487 334 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 FAM43AQ8N2R8 423 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 TGFBRAP1Q8WUH2 860 aa22.32■■□□□ 1.16
HMGN1-207ENST00000436324 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
HMGN1-207ENST00000436324 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
HMGN1-207ENST00000436324 NPM3O75607 178 aaKnown RBP22.31■■□□□ 1.16
HMGN1-207ENST00000436324 PLCG2P16885 1265 aa22.31■■□□□ 1.16
HMGN1-207ENST00000436324 RRP1P56182 461 aaKnown RBP22.31■■□□□ 1.16
HMGN1-207ENST00000436324 NOM1Q5C9Z4 860 aaKnown RBP22.31■■□□□ 1.16
HMGN1-207ENST00000436324 NOL9Q5SY16 702 aaKnown RBP22.31■■□□□ 1.16
HMGN1-207ENST00000436324 MAGEB6Q8N7X4 407 aa22.31■■□□□ 1.16
HMGN1-207ENST00000436324 DNAJC2Q99543 621 aaKnown RBP22.31■■□□□ 1.16
HMGN1-207ENST00000436324 PPP4CP60510 307 aa22.3■■□□□ 1.16
HMGN1-207ENST00000436324 TAF1CQ15572 869 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-207ENST00000436324 MAPKAPK5Q8IW41 473 aa22.3■■□□□ 1.16
HMGN1-207ENST00000436324 MIGA1Q8NAN2 632 aa22.3■■□□□ 1.16
HMGN1-207ENST00000436324 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.3■■□□□ 1.16
HMGN1-207ENST00000436324 PICK1Q9NRD5 415 aa22.3■■□□□ 1.16
HMGN1-207ENST00000436324 BTBD19C9JJ37 291 aa22.29■■□□□ 1.16
HMGN1-207ENST00000436324 MAP3K10Q02779 954 aa22.29■■□□□ 1.16
HMGN1-207ENST00000436324 MAP3K12Q12852 859 aa22.29■■□□□ 1.16
HMGN1-207ENST00000436324 SCYL3Q8IZE3 742 aa22.29■■□□□ 1.16
HMGN1-207ENST00000436324 LRRCC1Q9C099 1032 aa22.28■■□□□ 1.16
HMGN1-207ENST00000436324 ZFYVE28Q9HCC9 887 aa22.28■■□□□ 1.16
HMGN1-207ENST00000436324 ZHX2Q9Y6X8 837 aa22.28■■□□□ 1.16
HMGN1-207ENST00000436324 DOCK2Q92608 1830 aa22.27■■□□□ 1.16
HMGN1-207ENST00000436324 GOLIM4O00461 696 aa22.27■■□□□ 1.16
HMGN1-207ENST00000436324 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
HMGN1-207ENST00000436324 BOLA2Q9H3K6 86 aa22.27■■□□□ 1.16
HMGN1-207ENST00000436324 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-207ENST00000436324 SAP30BPQ9UHR5 308 aaKnown RBP22.27■■□□□ 1.16
HMGN1-207ENST00000436324 KCNH4Q9UQ05 1017 aa22.27■■□□□ 1.16
HMGN1-207ENST00000436324 MYO5AQ9Y4I1 1855 aaKnown RBP22.27■■□□□ 1.16
HMGN1-207ENST00000436324 MAST2Q6P0Q8 1798 aa22.27■■□□□ 1.16
HMGN1-207ENST00000436324 TBC1D12O60347 775 aa22.26■■□□□ 1.15
HMGN1-207ENST00000436324 CTNND1O60716 968 aaKnown RBP22.26■■□□□ 1.15
HMGN1-207ENST00000436324 IGSF3O75054 1194 aa22.26■■□□□ 1.15
HMGN1-207ENST00000436324 PTPRAP18433 802 aa22.26■■□□□ 1.15
HMGN1-207ENST00000436324 TTF1Q15361 905 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-207ENST00000436324 SLC4A8Q2Y0W8 1093 aa22.26■■□□□ 1.15
HMGN1-207ENST00000436324 CCDC84Q86UT8 332 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-207ENST00000436324 CD99L2Q8TCZ2 262 aa22.26■■□□□ 1.15
HMGN1-207ENST00000436324 FLT1P17948 1338 aa22.26■■□□□ 1.15
HMGN1-207ENST00000436324 LAMB1P07942 1786 aa22.25■■□□□ 1.15
HMGN1-207ENST00000436324 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.25■■□□□ 1.15
HMGN1-207ENST00000436324 PALD1Q9ULE6 856 aa22.25■■□□□ 1.15
HMGN1-207ENST00000436324 USP5P45974 858 aa22.24■■□□□ 1.15
HMGN1-207ENST00000436324 SP3Q02447 781 aa22.24■■□□□ 1.15
HMGN1-207ENST00000436324 SLC9C2Q5TAH2 1124 aa22.24■■□□□ 1.15
HMGN1-207ENST00000436324 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
HMGN1-207ENST00000436324 DHX36Q9H2U1 1008 aaKnown RBP22.24■■□□□ 1.15
HMGN1-207ENST00000436324 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
HMGN1-207ENST00000436324 TRIM17Q9Y577 477 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms