RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 MAGEA10P43363 369 aaPredicted RBP18.87■□□□□ 0.61
NELFE-204ENST00000436289 TCP10Q12799 353 aa18.87■□□□□ 0.61
NELFE-204ENST00000436289 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
NELFE-204ENST00000436289 CDC42EP5Q6NZY7 148 aa18.87■□□□□ 0.61
NELFE-204ENST00000436289 C11orf49Q9H6J7 331 aa18.87■□□□□ 0.61
NELFE-204ENST00000436289 PHF20L1A8MW92 1017 aa18.86■□□□□ 0.61
NELFE-204ENST00000436289 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
NELFE-204ENST00000436289 FAM110CQ1W6H9 321 aa18.86■□□□□ 0.61
NELFE-204ENST00000436289 GADL1Q6ZQY3 521 aa18.86■□□□□ 0.61
NELFE-204ENST00000436289 DIS3LQ8TF46 1054 aaKnown RBP18.86■□□□□ 0.61
NELFE-204ENST00000436289 TAOK2Q9UL54 1235 aa18.86■□□□□ 0.61
NELFE-204ENST00000436289 UNC80Q8N2C7 3258 aa18.85■□□□□ 0.61
NELFE-204ENST00000436289 GCLCP48506 637 aaPredicted RBP18.85■□□□□ 0.61
NELFE-204ENST00000436289 SRCIN1Q9C0H9 1055 aa18.85■□□□□ 0.61
NELFE-204ENST00000436289 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
NELFE-204ENST00000436289 LRRFIP2Q9Y608 721 aaKnown RBP18.85■□□□□ 0.61
NELFE-204ENST00000436289 CTNND1O60716 968 aaKnown RBP18.84■□□□□ 0.61
NELFE-204ENST00000436289 ENTPD3O75355 529 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 MAP3K10Q02779 954 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 PUM3Q15397 648 aaKnown RBP18.84■□□□□ 0.61
NELFE-204ENST00000436289 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 VGLL2Q8N8G2 317 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 USP40Q9NVE5 1235 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 OGDHLQ9ULD0 1010 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 AGTPBP1Q9UPW5 1226 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 DAGLAQ9Y4D2 1042 aa18.84■□□□□ 0.61
NELFE-204ENST00000436289 POTEB2H3BUK9 544 aa18.83■□□□□ 0.6
NELFE-204ENST00000436289 NFIAQ12857 509 aa18.83■□□□□ 0.6
NELFE-204ENST00000436289 FAM198AQ9UFP1 575 aa18.83■□□□□ 0.6
NELFE-204ENST00000436289 AK9Q5TCS8 1911 aa18.82■□□□□ 0.6
NELFE-204ENST00000436289 SYN1P17600 705 aa18.82■□□□□ 0.6
NELFE-204ENST00000436289 PABPC4Q13310 644 aaKnown RBP eCLIP18.82■□□□□ 0.6
NELFE-204ENST00000436289 RABL6Q3YEC7 729 aaPredicted RBP18.82■□□□□ 0.6
NELFE-204ENST00000436289 PROCA1Q8NCQ7 364 aaPredicted RBP18.82■□□□□ 0.6
NELFE-204ENST00000436289 IDI2Q9BXS1 227 aa18.82■□□□□ 0.6
NELFE-204ENST00000436289 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
NELFE-204ENST00000436289 UTYO14607 1347 aa18.81■□□□□ 0.6
NELFE-204ENST00000436289 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
NELFE-204ENST00000436289 KAZALD1Q96I82 304 aa18.81■□□□□ 0.6
NELFE-204ENST00000436289 SUCLG2Q96I99 432 aa18.81■□□□□ 0.6
NELFE-204ENST00000436289 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
NELFE-204ENST00000436289 LDHBP07195 334 aaKnown RBP18.8■□□□□ 0.6
NELFE-204ENST00000436289 FGFR2P21802 821 aa18.8■□□□□ 0.6
NELFE-204ENST00000436289 TRMT44Q8IYL2 757 aaKnown RBP18.8■□□□□ 0.6
NELFE-204ENST00000436289 LPIN2Q92539 896 aa18.8■□□□□ 0.6
NELFE-204ENST00000436289 GNL3LQ9NVN8 582 aaKnown RBP18.8■□□□□ 0.6
NELFE-204ENST00000436289 GJD2Q9UKL4 321 aa18.8■□□□□ 0.6
NELFE-204ENST00000436289 ALPK3Q96L96 1907 aa18.8■□□□□ 0.6
NELFE-204ENST00000436289 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
NELFE-204ENST00000436289 SLC5A1P13866 664 aa18.79■□□□□ 0.6
NELFE-204ENST00000436289 SLC4A10Q6U841 1118 aa18.79■□□□□ 0.6
NELFE-204ENST00000436289 WDR63Q8IWG1 891 aa18.79■□□□□ 0.6
NELFE-204ENST00000436289 ATRNL1Q5VV63 1379 aa18.79■□□□□ 0.6
NELFE-204ENST00000436289 DOCK3Q8IZD9 2030 aa18.78■□□□□ 0.6
NELFE-204ENST00000436289 TRIM75PA6NK02 468 aa18.78■□□□□ 0.6
NELFE-204ENST00000436289 NBPF7P0C2Y1 421 aaPredicted RBP18.78■□□□□ 0.6
NELFE-204ENST00000436289 XRCC5P13010 732 aaKnown RBP18.78■□□□□ 0.6
NELFE-204ENST00000436289 DIXDC1Q155Q3 683 aa18.78■□□□□ 0.6
NELFE-204ENST00000436289 ZSCAN29Q8IWY8 852 aaPredicted RBP18.78■□□□□ 0.6
NELFE-204ENST00000436289 SLF2Q8IX21 1173 aa18.78■□□□□ 0.6
NELFE-204ENST00000436289 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
NELFE-204ENST00000436289 SALL1Q9NSC2 1324 aa18.77■□□□□ 0.6
NELFE-204ENST00000436289 TBC1D12O60347 775 aa18.77■□□□□ 0.6
NELFE-204ENST00000436289 RGS3P49796 1198 aa18.77■□□□□ 0.6
NELFE-204ENST00000436289 MAP3K21Q5TCX8 1036 aa18.77■□□□□ 0.6
NELFE-204ENST00000436289 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
NELFE-204ENST00000436289 ZGPATQ8N5A5 531 aaKnown RBP18.77■□□□□ 0.6
NELFE-204ENST00000436289 PRDM6Q9NQX0 595 aa18.77■□□□□ 0.6
NELFE-204ENST00000436289 SEMA3EO15041 775 aa18.76■□□□□ 0.59
NELFE-204ENST00000436289 ZBTB22O15209 634 aa18.76■□□□□ 0.59
NELFE-204ENST00000436289 COL6A1P12109 1028 aa18.76■□□□□ 0.59
NELFE-204ENST00000436289 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
NELFE-204ENST00000436289 LBHD1Q9BQE6 289 aaPredicted RBP18.76■□□□□ 0.59
NELFE-204ENST00000436289 PRDX5P30044 214 aa18.75■□□□□ 0.59
NELFE-204ENST00000436289 ZNF697Q5TEC3 545 aa18.75■□□□□ 0.59
NELFE-204ENST00000436289 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
NELFE-204ENST00000436289 SYMPKQ92797 1274 aaKnown RBP18.75■□□□□ 0.59
NELFE-204ENST00000436289 GUCD1Q96NT3 240 aa18.75■□□□□ 0.59
NELFE-204ENST00000436289 DENND2AQ9ULE3 1009 aa18.75■□□□□ 0.59
NELFE-204ENST00000436289 TREML2Q5T2D2 321 aa18.74■□□□□ 0.59
NELFE-204ENST00000436289 ZNF280CQ8ND82 737 aa18.74■□□□□ 0.59
NELFE-204ENST00000436289 FAM163AQ96GL9 167 aaPredicted RBP18.74■□□□□ 0.59
NELFE-204ENST00000436289 NUDT12Q9BQG2 462 aa18.74■□□□□ 0.59
NELFE-204ENST00000436289 OSBPL5Q9H0X9 879 aaPredicted RBP18.74■□□□□ 0.59
NELFE-204ENST00000436289 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
NELFE-204ENST00000436289 PFASO15067 1338 aa18.74■□□□□ 0.59
NELFE-204ENST00000436289 EYA2O00167 538 aa18.73■□□□□ 0.59
NELFE-204ENST00000436289 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
NELFE-204ENST00000436289 PRKAR2AP13861 404 aaKnown RBP18.73■□□□□ 0.59
NELFE-204ENST00000436289 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
NELFE-204ENST00000436289 TRIB2Q92519 343 aa18.73■□□□□ 0.59
NELFE-204ENST00000436289 FBXO3Q9UK99 471 aa18.73■□□□□ 0.59
NELFE-204ENST00000436289 MDM2Q00987 491 aaPredicted RBP18.72■□□□□ 0.59
NELFE-204ENST00000436289 TRIM32Q13049 653 aa18.72■□□□□ 0.59
NELFE-204ENST00000436289 SPP2Q13103 211 aa18.72■□□□□ 0.59
NELFE-204ENST00000436289 SH3BP5LQ7L8J4 393 aa18.72■□□□□ 0.59
NELFE-204ENST00000436289 GAKO14976 1311 aa18.72■□□□□ 0.59
NELFE-204ENST00000436289 DDTLA6NHG4 134 aaPredicted RBP18.71■□□□□ 0.59
NELFE-204ENST00000436289 MAP4K4O95819 1239 aaPredicted RBP18.71■□□□□ 0.59
NELFE-204ENST00000436289 CYP2B6P20813 491 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms