RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 CLMNQ96JQ2 1002 aa25.44■■□□□ 1.66
GTF3A-203ENST00000435781 TTC41PQ6P2S7 1318 aa25.43■■□□□ 1.66
GTF3A-203ENST00000435781 SALL3Q9BXA9 1300 aa25.43■■□□□ 1.66
GTF3A-203ENST00000435781 UNCXA6NJT0 531 aa25.43■■□□□ 1.66
GTF3A-203ENST00000435781 HSPA1AP0DMV8 641 aaKnown RBP25.43■■□□□ 1.66
GTF3A-203ENST00000435781 HSPA1BP0DMV9 641 aaKnown RBP25.43■■□□□ 1.66
GTF3A-203ENST00000435781 DYNLL1P63167 89 aaKnown RBP25.43■■□□□ 1.66
GTF3A-203ENST00000435781 SLC9C2Q5TAH2 1124 aa25.43■■□□□ 1.66
GTF3A-203ENST00000435781 DCAF15Q66K64 600 aa25.43■■□□□ 1.66
GTF3A-203ENST00000435781 SH3BP5LQ7L8J4 393 aa25.43■■□□□ 1.66
GTF3A-203ENST00000435781 COL2A1P02458 1487 aaPredicted RBP25.42■■□□□ 1.66
GTF3A-203ENST00000435781 MAP2K1Q02750 393 aaPredicted RBP25.42■■□□□ 1.66
GTF3A-203ENST00000435781 ANKRD13AQ8IZ07 590 aa25.42■■□□□ 1.66
GTF3A-203ENST00000435781 MIGA1Q8NAN2 632 aa25.42■■□□□ 1.66
GTF3A-203ENST00000435781 WBP1LQ9NX94 342 aa25.42■■□□□ 1.66
GTF3A-203ENST00000435781 ATRNL1Q5VV63 1379 aa25.42■■□□□ 1.66
GTF3A-203ENST00000435781 SIPA1L1O43166 1804 aa25.42■■□□□ 1.66
GTF3A-203ENST00000435781 DDTLA6NHG4 134 aaPredicted RBP25.41■■□□□ 1.66
GTF3A-203ENST00000435781 MX1P20591 662 aa25.41■■□□□ 1.66
GTF3A-203ENST00000435781 MIGA2Q7L4E1 593 aa25.41■■□□□ 1.66
GTF3A-203ENST00000435781 ZSCAN29Q8IWY8 852 aaPredicted RBP25.41■■□□□ 1.66
GTF3A-203ENST00000435781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.41■■□□□ 1.66
GTF3A-203ENST00000435781 SLC10A4Q96EP9 437 aa25.41■■□□□ 1.66
GTF3A-203ENST00000435781 CSRNP1Q96S65 589 aa25.41■■□□□ 1.66
GTF3A-203ENST00000435781 NAV1Q8NEY1 1877 aa25.4■■□□□ 1.66
GTF3A-203ENST00000435781 ZNF532Q9HCE3 1301 aa25.4■■□□□ 1.66
GTF3A-203ENST00000435781 TCRBV5S4A2TA0A5A2 114 aa25.4■■□□□ 1.66
GTF3A-203ENST00000435781 KIF23Q02241 960 aaPredicted RBP25.4■■□□□ 1.66
GTF3A-203ENST00000435781 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.4■■□□□ 1.66
GTF3A-203ENST00000435781 PI4K2BQ8TCG2 481 aa25.4■■□□□ 1.66
GTF3A-203ENST00000435781 ZNF341Q9BYN7 854 aa25.4■■□□□ 1.66
GTF3A-203ENST00000435781 OSBPL5Q9H0X9 879 aaPredicted RBP25.4■■□□□ 1.66
GTF3A-203ENST00000435781 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.4■■□□□ 1.66
GTF3A-203ENST00000435781 ERC2O15083 957 aa25.39■■□□□ 1.66
GTF3A-203ENST00000435781 MAP3K9P80192 1104 aa25.39■■□□□ 1.66
GTF3A-203ENST00000435781 B4GALNT3Q6L9W6 998 aa25.39■■□□□ 1.66
GTF3A-203ENST00000435781 CERS3Q8IU89 383 aa25.39■■□□□ 1.66
GTF3A-203ENST00000435781 TGFBRAP1Q8WUH2 860 aa25.39■■□□□ 1.66
GTF3A-203ENST00000435781 WRNIP1Q96S55 665 aa25.39■■□□□ 1.66
GTF3A-203ENST00000435781 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.39■■□□□ 1.66
GTF3A-203ENST00000435781 GLRX3O76003 335 aaKnown RBP25.38■■□□□ 1.65
GTF3A-203ENST00000435781 ADD2P35612 726 aa25.38■■□□□ 1.65
GTF3A-203ENST00000435781 VGLL4Q14135 290 aa25.38■■□□□ 1.65
GTF3A-203ENST00000435781 SPRYD7Q5W111 196 aa25.38■■□□□ 1.65
GTF3A-203ENST00000435781 RIOK1Q9BRS2 568 aaKnown RBP25.38■■□□□ 1.65
GTF3A-203ENST00000435781 LNPKQ9C0E8 428 aa25.38■■□□□ 1.65
GTF3A-203ENST00000435781 FLT1P17948 1338 aa25.37■■□□□ 1.65
GTF3A-203ENST00000435781 DDX60LQ5H9U9 1706 aaKnown RBP25.37■■□□□ 1.65
GTF3A-203ENST00000435781 MKRN3Q13064 507 aaKnown RBP25.37■■□□□ 1.65
GTF3A-203ENST00000435781 MAPKAPK5Q8IW41 473 aa25.37■■□□□ 1.65
GTF3A-203ENST00000435781 AIDAQ96BJ3 306 aa25.37■■□□□ 1.65
GTF3A-203ENST00000435781 WNK4Q96J92 1243 aa25.37■■□□□ 1.65
GTF3A-203ENST00000435781 ELP3Q9H9T3 547 aa25.37■■□□□ 1.65
GTF3A-203ENST00000435781 CSADQ9Y600 493 aa25.37■■□□□ 1.65
GTF3A-203ENST00000435781 DOCK1Q14185 1865 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 ATAD5Q96QE3 1844 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 MAGEB6P1A0A0J9YX57 407 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 NUCB1Q02818 461 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 SLFNL1Q499Z3 407 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 STAP2Q9UGK3 403 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 ZNF112Q9UJU3 913 aa25.36■■□□□ 1.65
GTF3A-203ENST00000435781 BAZ2AQ9UIF9 1905 aaKnown RBP25.35■■□□□ 1.65
GTF3A-203ENST00000435781 MAP3K10Q02779 954 aa25.35■■□□□ 1.65
GTF3A-203ENST00000435781 CHD1LQ86WJ1 897 aa25.35■■□□□ 1.65
GTF3A-203ENST00000435781 KBTBD3Q8NAB2 608 aa25.35■■□□□ 1.65
GTF3A-203ENST00000435781 ZKSCAN4Q969J2 545 aaPredicted RBP25.35■■□□□ 1.65
GTF3A-203ENST00000435781 FOXN1O15353 648 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 CHGBP05060 677 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 SLURP2P0DP57 97 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 ZBTB48P10074 688 aaPredicted RBP25.34■■□□□ 1.65
GTF3A-203ENST00000435781 INPP5BP32019 993 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 GJA5P36382 358 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 PDE1AP54750 535 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 UBE3CQ15386 1083 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 ZSCAN25Q6NSZ9 544 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 BEGAINQ9BUH8 593 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 SNCAIPQ9Y6H5 919 aa25.34■■□□□ 1.65
GTF3A-203ENST00000435781 REM2Q8IYK8 340 aaPredicted RBP25.33■■□□□ 1.65
GTF3A-203ENST00000435781 OPTNQ96CV9 577 aa25.33■■□□□ 1.65
GTF3A-203ENST00000435781 DHX36Q9H2U1 1008 aaKnown RBP25.33■■□□□ 1.65
GTF3A-203ENST00000435781 PHF20L1A8MW92 1017 aa25.32■■□□□ 1.64
GTF3A-203ENST00000435781 USP5P45974 858 aa25.32■■□□□ 1.64
GTF3A-203ENST00000435781 LCORLQ8N3X6 602 aa25.32■■□□□ 1.64
GTF3A-203ENST00000435781 CNKSR2Q8WXI2 1034 aa25.32■■□□□ 1.64
GTF3A-203ENST00000435781 PHIPQ8WWQ0 1821 aa25.31■■□□□ 1.64
GTF3A-203ENST00000435781 TBC1D12O60347 775 aa25.31■■□□□ 1.64
GTF3A-203ENST00000435781 CRNKL1Q9BZJ0 848 aaKnown RBP25.31■■□□□ 1.64
GTF3A-203ENST00000435781 ARMT1Q9H993 441 aa25.31■■□□□ 1.64
GTF3A-203ENST00000435781 SAP30BPQ9UHR5 308 aaKnown RBP25.31■■□□□ 1.64
GTF3A-203ENST00000435781 SPDYE5A6NIY4 337 aa25.3■■□□□ 1.64
GTF3A-203ENST00000435781 FAM196BA6NMK8 535 aa25.3■■□□□ 1.64
GTF3A-203ENST00000435781 MBD4O95243 580 aa25.3■■□□□ 1.64
GTF3A-203ENST00000435781 NOL9Q5SY16 702 aaKnown RBP25.3■■□□□ 1.64
GTF3A-203ENST00000435781 PI4KBQ9UBF8 816 aa25.3■■□□□ 1.64
GTF3A-203ENST00000435781 PALD1Q9ULE6 856 aa25.3■■□□□ 1.64
GTF3A-203ENST00000435781 CA12O43570 354 aa25.29■■□□□ 1.64
GTF3A-203ENST00000435781 ERO1BQ86YB8 467 aa25.29■■□□□ 1.64
GTF3A-203ENST00000435781 OTUD5Q96G74 571 aa25.29■■□□□ 1.64
GTF3A-203ENST00000435781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.29■■□□□ 1.64
GTF3A-203ENST00000435781 PTPRFP10586 1907 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms