RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 CFAP157Q5JU67 520 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 OTUD6AQ7L8S5 288 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 SULF1Q8IWU6 871 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 AATFQ9NY61 560 aaKnown RBP eCLIP11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 NLRX1Q86UT6 975 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 TEKT1Q969V4 418 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 TBC1D31Q96DN5 1066 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 CARD10Q9BWT7 1032 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 ADCY7P51828 1080 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.93□□□□□ -0.5
LDLRAD4-204ENST00000435606 ARID4AP29374 1257 aaPredicted RBP11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 RASA3Q14644 834 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 TCEANC2Q96MN5 208 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 ZKSCAN3Q9BRR0 538 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 PRAG1Q86YV5 1406 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 TRAF5O00463 557 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 TUBB4AP04350 444 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 PPP2R5BQ15173 497 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 RIOK1Q9BRS2 568 aaKnown RBP11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 VWA3AA6NCI4 1184 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 OPA1O60313 960 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 TCP10Q12799 353 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 CPXCR1Q8N123 301 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 GPR161Q8N6U8 529 aaKnown RBP11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 ANKS4BQ8N8V4 417 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 F13A1P00488 732 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 KRT9P35527 623 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 GIMAP6Q6P9H5 292 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
LDLRAD4-204ENST00000435606 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 XAGE2Q96GT9 111 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 ARMT1Q9H993 441 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 AOPEPQ8N6M6 819 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 MCTP2Q6DN12 878 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 ERVV-2B6SEH9 535 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 PRPF6O94906 941 aaKnown RBP11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 ELP1O95163 1332 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 CALCOCO2Q13137 446 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 APPBP2Q92624 585 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 CNKSR1Q969H4 720 aa11.91□□□□□ -0.5
LDLRAD4-204ENST00000435606 SYT1P21579 422 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 NCAPH2Q6IBW4 605 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 ZNF830Q96NB3 372 aaPredicted RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 TRIM7Q9C029 511 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 KIF21AQ7Z4S6 1674 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 ERCC5P28715 1186 aaPredicted RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 GEN1Q17RS7 908 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 FAM47CQ5HY64 1035 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 NSMFQ6X4W1 530 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 TRAPPC8Q9Y2L5 1435 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 GIPC1O14908 333 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 TNFAIP3P21580 790 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 ZNF174Q15697 407 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 USH1GQ495M9 461 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 TBC1D32Q96NH3 1257 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 PLIN2Q99541 437 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 RTEL1Q9NZ71 1219 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 LUC7L2Q9Y383 392 aaKnown RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 MAST1Q9Y2H9 1570 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 C2CD5Q86YS7 1000 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 MKRN1Q9UHC7 482 aaKnown RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 ABCC2Q92887 1545 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 TRPC5Q9UL62 973 aaPredicted RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 GADL1Q6ZQY3 521 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 EP400NLQ6ZTU2 488 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 CACYBPQ9HB71 228 aaKnown RBP11.9□□□□□ -0.5
LDLRAD4-204ENST00000435606 A0A1W2PP64 1363 aa11.9□□□□□ -0.51
LDLRAD4-204ENST00000435606 TNNC1P63316 161 aa11.9□□□□□ -0.51
LDLRAD4-204ENST00000435606 ARHGEF16Q5VV41 709 aa11.9□□□□□ -0.51
LDLRAD4-204ENST00000435606 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.51
LDLRAD4-204ENST00000435606 WDR62O43379 1518 aa11.89□□□□□ -0.51
LDLRAD4-204ENST00000435606 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
LDLRAD4-204ENST00000435606 RXRAP19793 462 aa11.89□□□□□ -0.51
LDLRAD4-204ENST00000435606 CCDC6Q16204 474 aa11.89□□□□□ -0.51
LDLRAD4-204ENST00000435606 KLHL40Q2TBA0 621 aa11.89□□□□□ -0.51
LDLRAD4-204ENST00000435606 FAM193BQ96PV7 902 aaPredicted RBP11.89□□□□□ -0.51
LDLRAD4-204ENST00000435606 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms