RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 PSMD14O00487 310 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 CRKP46108 304 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 MMP14P50281 582 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 RHBDL3P58872 404 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 KIAA0825Q8IV33 1275 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 AGBL3Q8NEM8 1001 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 GMLQ99445 158 aa13.45□□□□□ -0.26
PCOTH-203ENST00000435039 WDR19Q8NEZ3 1342 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 COL2A1P02458 1487 aaPredicted RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 RAD17O75943 681 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 CD2BP2O95400 341 aaKnown RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 PCP11498 1178 aaKnown RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 USP5P45974 858 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 NT5C2P49902 561 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 HAND2P61296 217 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 PPARAQ07869 468 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 DPY19L2Q6NUT2 758 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 TBC1D10CQ8IV04 446 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 STAG1Q8WVM7 1258 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 RNF41Q9H4P4 317 aaPredicted RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 MKRN1Q9UHC7 482 aaKnown RBP13.44□□□□□ -0.26
PCOTH-203ENST00000435039 HDAC9Q9UKV0 1011 aa13.44□□□□□ -0.26
PCOTH-203ENST00000435039 FLT1P17948 1338 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 FZD9O00144 591 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 RPS12P25398 132 aaKnown RBP13.43□□□□□ -0.26
PCOTH-203ENST00000435039 SCNN1DP51172 638 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 CXCL9Q07325 125 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 TRDNQ13061 729 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 TNIP1Q15025 636 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 COL13A1Q5TAT6 717 aaPredicted RBP13.43□□□□□ -0.26
PCOTH-203ENST00000435039 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
PCOTH-203ENST00000435039 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 NCOA7Q8NI08 942 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 CNNM2Q9H8M5 875 aa13.43□□□□□ -0.26
PCOTH-203ENST00000435039 NEDD4P46934 1319 aa13.42□□□□□ -0.26
PCOTH-203ENST00000435039 SCN4AP35499 1836 aa13.42□□□□□ -0.26
PCOTH-203ENST00000435039 EIF6P56537 245 aaKnown RBP13.42□□□□□ -0.26
PCOTH-203ENST00000435039 AKNAD1Q5T1N1 836 aa13.42□□□□□ -0.26
PCOTH-203ENST00000435039 APOBEC3HQ6NTF7 200 aaKnown RBP13.42□□□□□ -0.26
PCOTH-203ENST00000435039 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
PCOTH-203ENST00000435039 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
PCOTH-203ENST00000435039 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
PCOTH-203ENST00000435039 MYH8P13535 1937 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
PCOTH-203ENST00000435039 SLC3A2P08195 630 aaKnown RBP13.41□□□□□ -0.26
PCOTH-203ENST00000435039 CPA1P15085 419 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 AK2P54819 239 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
PCOTH-203ENST00000435039 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 MTMR14Q8NCE2 650 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 TGFBRAP1Q8WUH2 860 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 KRT23Q9C075 422 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 SIPA1L1O43166 1804 aa13.41□□□□□ -0.26
PCOTH-203ENST00000435039 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 USP17L21D6R901 530 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 WDHD1O75717 1129 aaPredicted RBP13.4□□□□□ -0.26
PCOTH-203ENST00000435039 USP17L8P0C7I0 530 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 MCM5P33992 734 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 MFSD6Q6ZSS7 791 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 MAPKAPK5Q8IW41 473 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
PCOTH-203ENST00000435039 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 ORC4O43929 436 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 FGRP09769 529 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 ZNF280AP59817 542 aaPredicted RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 COL9A3Q14050 684 aaPredicted RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 MTA3Q9BTC8 594 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 IDI2Q9BXS1 227 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 SH2B1Q9NRF2 756 aaPredicted RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 USP40Q9NVE5 1235 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
PCOTH-203ENST00000435039 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
PCOTH-203ENST00000435039 ATRNL1Q5VV63 1379 aa13.38□□□□□ -0.27
PCOTH-203ENST00000435039 PRC1O43663 620 aa13.38□□□□□ -0.27
PCOTH-203ENST00000435039 PDE4BQ07343 736 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms