RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 KRT27Q7Z3Y8 459 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 SMARCE1Q969G3 411 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 TTF2Q9UNY4 1162 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 LRMPQ12912 555 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 SNW1Q13573 536 aaKnown RBP14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 PRKG1Q13976 671 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 ZSWIM4Q9H7M6 989 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 STK32BQ9NY57 414 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 MAPK8IP1Q9UQF2 711 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 SMTNL1A8MU46 457 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 FOXO4P98177 505 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 MTX1Q13505 466 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 TMEM132AQ24JP5 1023 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 BCL2L12Q9HB09 334 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
LRRTM1-206ENST00000433224 TERF1P54274 439 aa14.27□□□□□ -0.12
LRRTM1-206ENST00000433224 PIK3AP1Q6ZUJ8 805 aa14.27□□□□□ -0.12
LRRTM1-206ENST00000433224 TCP11L1Q9NUJ3 509 aa14.27□□□□□ -0.12
LRRTM1-206ENST00000433224 TAF6LQ9Y6J9 622 aa14.27□□□□□ -0.12
LRRTM1-206ENST00000433224 WDR66Q8TBY9 1149 aa14.27□□□□□ -0.12
LRRTM1-206ENST00000433224 H0YIN7 160 aa14.27□□□□□ -0.13
LRRTM1-206ENST00000433224 GTF2F1P35269 517 aaKnown RBP eCLIP14.27□□□□□ -0.13
LRRTM1-206ENST00000433224 NECTIN1Q15223 517 aa14.27□□□□□ -0.13
LRRTM1-206ENST00000433224 LETM2Q2VYF4 491 aa14.27□□□□□ -0.13
LRRTM1-206ENST00000433224 TTC6Q86TZ1 520 aa14.27□□□□□ -0.13
LRRTM1-206ENST00000433224 CYP2E1P05181 493 aaPredicted RBP14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 DBNDD1Q9H9R9 158 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 CTAGE5O15320 804 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 CCP110O43303 1012 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 ERCC3P19447 782 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 LARGE2Q8N3Y3 721 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 CIAO1O76071 339 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 TOP1P11387 765 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 KAZALD1Q96I82 304 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 TNKSO95271 1327 aa14.26□□□□□ -0.13
LRRTM1-206ENST00000433224 DNA2P51530 1060 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 SMAP1Q8IYB5 467 aaPredicted RBP14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ZNF654Q8IZM8 581 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 CBX8Q9HC52 389 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 PAXBP1Q9Y5B6 917 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 KIAA1210Q9ULL0 1709 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 PRDX5P30044 214 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ITPK1Q13572 414 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 PYCARDQ9ULZ3 195 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 BTBD18B2RXH4 712 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 HSPA1LP34931 641 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ADD2P35612 726 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 NOM1Q5C9Z4 860 aaKnown RBP14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ANO1Q5XXA6 986 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ATG9AQ7Z3C6 839 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 GPIHBP1Q8IV16 184 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 JDP2Q8WYK2 163 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 PKD2L1Q9P0L9 805 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 ZDHHC9Q9Y397 364 aa14.25□□□□□ -0.13
LRRTM1-206ENST00000433224 RICTORQ6R327 1708 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 CEMIPQ8WUJ3 1361 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 ARHGEF28Q8N1W1 1705 aaKnown RBP14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 DNAI1Q9UI46 699 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 SAMM50Q9Y512 469 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 A0A0G2JLW4 131 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 KRT222Q8N1A0 295 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 MYO5BQ9ULV0 1848 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 KRT2P35908 639 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 FCHSD1Q86WN1 690 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 EYA3Q99504 573 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 USP40Q9NVE5 1235 aa14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.24□□□□□ -0.13
LRRTM1-206ENST00000433224 PPIP5K2O43314 1243 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 CBFA2T2O43439 604 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 NEMFO60524 1076 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 NR1I2O75469 434 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 ZFYVE27Q5T4F4 411 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 RRAGBQ5VZM2 374 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 DYNLL2Q96FJ2 89 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 MYO1BO43795 1136 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 USP17L8P0C7I0 530 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 STAT6P42226 847 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 TMEM266Q2M3C6 531 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 SOS2Q07890 1332 aaPredicted RBP14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 POLR2DO15514 142 aaKnown RBP14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 MMP10P09238 476 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 PLCG2P16885 1265 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 C2CD5Q86YS7 1000 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 LRRC47Q8N1G4 583 aaKnown RBP14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
LRRTM1-206ENST00000433224 GPKOWQ92917 476 aaPredicted RBP eCLIP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms