RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 AKTIPQ9H8T0 292 aa9.19□□□□□ -0.94
TTR-202ENST00000432547 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
TTR-202ENST00000432547 BLMP54132 1417 aaPredicted RBP9.19□□□□□ -0.94
TTR-202ENST00000432547 SBF2Q86WG5 1849 aa9.19□□□□□ -0.94
TTR-202ENST00000432547 LOC102724428A0A0B4J2F2 783 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 FAM83GA6ND36 823 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 PIK3C2AO00443 1686 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 MMP20O60882 483 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 XYLBO75191 536 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 SIK1P57059 783 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 SETDB1Q15047 1291 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 Q6ZS46 218 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 TMEM130Q8N3G9 435 aa9.18□□□□□ -0.94
TTR-202ENST00000432547 NUDT16Q96DE0 195 aaKnown RBP9.18□□□□□ -0.94
TTR-202ENST00000432547 PARP4Q9UKK3 1724 aaKnown RBP9.18□□□□□ -0.94
TTR-202ENST00000432547 MON2Q7Z3U7 1717 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 LRP5O75197 1615 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
TTR-202ENST00000432547 FSTP19883 344 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 TREML1Q86YW5 311 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 RGL4Q8IZJ4 473 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 NGDNQ8NEJ9 315 aaKnown RBP9.17□□□□□ -0.94
TTR-202ENST00000432547 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 COL18A1P39060 1754 aa9.17□□□□□ -0.94
TTR-202ENST00000432547 RREB1Q92766 1687 aa9.16□□□□□ -0.94
TTR-202ENST00000432547 LMOD1P29536 600 aaPredicted RBP9.16□□□□□ -0.94
TTR-202ENST00000432547 FAM26DQ5JW98 314 aa9.16□□□□□ -0.94
TTR-202ENST00000432547 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
TTR-202ENST00000432547 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
TTR-202ENST00000432547 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
TTR-202ENST00000432547 NSUN5Q96P11 429 aaKnown RBP9.16□□□□□ -0.94
TTR-202ENST00000432547 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
TTR-202ENST00000432547 BTG4Q9NY30 223 aa9.16□□□□□ -0.94
TTR-202ENST00000432547 COX20Q5RI15 118 aa9.15□□□□□ -0.94
TTR-202ENST00000432547 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.94
TTR-202ENST00000432547 CALR3Q96L12 384 aaKnown RBP9.15□□□□□ -0.94
TTR-202ENST00000432547 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
TTR-202ENST00000432547 TRIM33Q9UPN9 1127 aa9.15□□□□□ -0.94
TTR-202ENST00000432547 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
TTR-202ENST00000432547 USP54Q70EL1 1684 aa9.15□□□□□ -0.94
TTR-202ENST00000432547 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 LTN1O94822 1766 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 KIAA0232Q92628 1395 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 CAMTA1Q9Y6Y1 1673 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 ACEP12821 1306 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 SPATA31A5Q5VU36 1347 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 SPATA31A7Q8IWB4 1347 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
TTR-202ENST00000432547 TRIP4Q15650 581 aaPredicted RBP9.14□□□□□ -0.95
TTR-202ENST00000432547 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 KRT27Q7Z3Y8 459 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 SIN3AQ96ST3 1273 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 RGPD3A6NKT7 1758 aaPredicted RBP9.14□□□□□ -0.95
TTR-202ENST00000432547 RGPD4Q7Z3J3 1758 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 NUP188Q5SRE5 1749 aa9.14□□□□□ -0.95
TTR-202ENST00000432547 CENPJQ9HC77 1338 aaPredicted RBP9.13□□□□□ -0.95
TTR-202ENST00000432547 TM4SF5O14894 197 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 MED26O95402 600 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 SOX18P35713 384 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 CD97P48960 835 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 NBPF8Q3BBV2 869 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 ETFBKMTQ8IXQ9 262 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 SLIT3O75094 1523 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 PEAK1Q9H792 1746 aa9.13□□□□□ -0.95
TTR-202ENST00000432547 BRD4O60885 1362 aaPredicted RBP9.12□□□□□ -0.95
TTR-202ENST00000432547 PSAPP07602 524 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 ARID4AP29374 1257 aaPredicted RBP9.12□□□□□ -0.95
TTR-202ENST00000432547 SSTR4P31391 388 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 GALNT11Q8NCW6 608 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 UBL7Q96S82 380 aaPredicted RBP9.12□□□□□ -0.95
TTR-202ENST00000432547 PRDM11Q9NQV5 511 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 PCMTD2Q9NV79 361 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 SSH2Q76I76 1423 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 LRRC37A3O60309 1634 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 CPDO75976 1380 aa9.12□□□□□ -0.95
TTR-202ENST00000432547 USP19O94966 1318 aa9.11□□□□□ -0.95
TTR-202ENST00000432547 COL13A1Q5TAT6 717 aaPredicted RBP9.11□□□□□ -0.95
TTR-202ENST00000432547 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.11□□□□□ -0.95
TTR-202ENST00000432547 DEFB132Q7Z7B7 95 aa9.11□□□□□ -0.95
TTR-202ENST00000432547 SAP130Q9H0E3 1048 aa9.11□□□□□ -0.95
TTR-202ENST00000432547 GOLGA2P5Q9HBQ8 144 aa9.11□□□□□ -0.95
TTR-202ENST00000432547 DISP2A7MBM2 1401 aa9.11□□□□□ -0.95
TTR-202ENST00000432547 USP6P35125 1406 aa9.11□□□□□ -0.95
TTR-202ENST00000432547 SPATA31A1Q5TZJ5 1347 aa9.1□□□□□ -0.95
TTR-202ENST00000432547 WISP1O95388 367 aa9.1□□□□□ -0.95
TTR-202ENST00000432547 GHRHP01286 108 aa9.1□□□□□ -0.95
TTR-202ENST00000432547 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
TTR-202ENST00000432547 SLC51AQ86UW1 340 aa9.1□□□□□ -0.95
TTR-202ENST00000432547 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
TTR-202ENST00000432547 COL5A2P05997 1499 aaPredicted RBP9.09□□□□□ -0.95
TTR-202ENST00000432547 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
TTR-202ENST00000432547 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
TTR-202ENST00000432547 CHRNA2Q15822 529 aa9.09□□□□□ -0.95
TTR-202ENST00000432547 NUTM2GQ5VZR2 741 aa9.09□□□□□ -0.95
TTR-202ENST00000432547 ABTB2Q8N961 1025 aa9.09□□□□□ -0.95
TTR-202ENST00000432547 FAM200AQ8TCP9 573 aa9.09□□□□□ -0.95
TTR-202ENST00000432547 PRIMPOLQ96LW4 560 aa9.09□□□□□ -0.95
TTR-202ENST00000432547 PCGF6Q9BYE7 350 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms