RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.32
RFTN1-203ENST00000432519 C17orf53Q8N3J3 647 aaPredicted RBP17.08■□□□□ 0.32
RFTN1-203ENST00000432519 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
RFTN1-203ENST00000432519 SLC12A7Q9Y666 1083 aa17.08■□□□□ 0.32
RFTN1-203ENST00000432519 ZNF500O60304 480 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-203ENST00000432519 PRDM1O75626 825 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 FBXO33Q7Z6M2 555 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 NACAP1Q9BZK3 213 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 PRDX5P30044 214 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 SLC26A6Q9BXS9 759 aa17.07■□□□□ 0.32
RFTN1-203ENST00000432519 GNAT2P19087 354 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-203ENST00000432519 STK38Q15208 465 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 FMR1NBQ8N0W7 255 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-203ENST00000432519 FBXW7Q969H0 707 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
RFTN1-203ENST00000432519 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 WDHD1O75717 1129 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-203ENST00000432519 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
RFTN1-203ENST00000432519 ZNF165P49910 485 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 ATL3Q6DD88 541 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 SASS6Q6UVJ0 657 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 CHMP4CQ96CF2 233 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
RFTN1-203ENST00000432519 POLR3EQ9NVU0 708 aa17.06■□□□□ 0.32
RFTN1-203ENST00000432519 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-203ENST00000432519 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 KRT23Q9C075 422 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 CNNM2Q9H8M5 875 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 SPTLC2O15270 562 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 MECOMQ03112 1051 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
RFTN1-203ENST00000432519 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-203ENST00000432519 MYH13Q9UKX3 1938 aa17.05■□□□□ 0.32
RFTN1-203ENST00000432519 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 SLC4A8Q2Y0W8 1093 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 AXDND1Q5T1B0 1012 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-203ENST00000432519 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 TAF1LQ8IZX4 1826 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 NFIXQ14938 502 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 WTAPQ15007 396 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 SF3A1Q15459 793 aaKnown RBP17.04■□□□□ 0.32
RFTN1-203ENST00000432519 MRPS27Q92552 414 aaKnown RBP17.04■□□□□ 0.32
RFTN1-203ENST00000432519 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-203ENST00000432519 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
RFTN1-203ENST00000432519 KCNJ14Q9UNX9 436 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 KINO60870 393 aaKnown RBP17.04■□□□□ 0.32
RFTN1-203ENST00000432519 OFD1O75665 1012 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 KCNF1Q9H3M0 494 aa17.04■□□□□ 0.32
RFTN1-203ENST00000432519 HIBADHP31937 336 aaKnown RBP17.03■□□□□ 0.32
RFTN1-203ENST00000432519 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 CDKL5O76039 1030 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 YEATS4O95619 227 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 IQCB1Q15051 598 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 SEC23AQ15436 765 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 TNKSO95271 1327 aa17.03■□□□□ 0.32
RFTN1-203ENST00000432519 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 USP17L12C9JPN9 530 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 USP17L21D6R901 530 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 RFC4P35249 363 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 IRS2Q9Y4H2 1338 aa17.02■□□□□ 0.32
RFTN1-203ENST00000432519 BTBD18B2RXH4 712 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 NPHP1O15259 732 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 FMNL1O95466 1100 aaPredicted RBP17.02■□□□□ 0.31
RFTN1-203ENST00000432519 CYP2D6P10635 497 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 IFNAR1P17181 557 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 GRIK5Q16478 980 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 RTN1Q16799 776 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.31
RFTN1-203ENST00000432519 KCNG4Q8TDN1 519 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 CLIC6Q96NY7 704 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.31
RFTN1-203ENST00000432519 BAZ2BQ9UIF8 2168 aaKnown RBP17.02■□□□□ 0.31
RFTN1-203ENST00000432519 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 NMT2O60551 498 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 SSRP1Q08945 709 aaKnown RBP17.01■□□□□ 0.31
RFTN1-203ENST00000432519 PTPAQ15257 358 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 CPLX2Q6PUV4 134 aaKnown RBP17.01■□□□□ 0.31
RFTN1-203ENST00000432519 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
RFTN1-203ENST00000432519 MAP3K14Q99558 947 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
RFTN1-203ENST00000432519 ANAPC4Q9UJX5 808 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms