RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 XPCQ01831 940 aaPredicted RBP6.07□□□□□ -1.44
CLK1-204ENST00000432425 PSMD2Q13200 908 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 ZAR1Q86SH2 424 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 PIM2Q9P1W9 311 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 PARP2Q9UGN5 583 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 PCDHGC5Q9Y5F6 944 aa6.07□□□□□ -1.44
CLK1-204ENST00000432425 TRIM37O94972 964 aa6.06□□□□□ -1.44
CLK1-204ENST00000432425 GRIN3AQ8TCU5 1115 aa6.06□□□□□ -1.44
CLK1-204ENST00000432425 LGR6Q9HBX8 967 aa6.06□□□□□ -1.44
CLK1-204ENST00000432425 DISC1Q9NRI5 854 aa6.06□□□□□ -1.44
CLK1-204ENST00000432425 RNF19AQ9NV58 838 aa6.06□□□□□ -1.44
CLK1-204ENST00000432425 ADMP35318 185 aa6.05□□□□□ -1.44
CLK1-204ENST00000432425 CYP27A1Q02318 531 aa6.05□□□□□ -1.44
CLK1-204ENST00000432425 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
CLK1-204ENST00000432425 SMYD4Q8IYR2 804 aaPredicted RBP6.05□□□□□ -1.44
CLK1-204ENST00000432425 PICK1Q9NRD5 415 aa6.05□□□□□ -1.44
CLK1-204ENST00000432425 CYP8B1Q9UNU6 501 aa6.05□□□□□ -1.44
CLK1-204ENST00000432425 HCLS1P14317 486 aaPredicted RBP6.04□□□□□ -1.44
CLK1-204ENST00000432425 ERVK-24P63145 666 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 CCDC85BQ15834 202 aaPredicted RBP6.04□□□□□ -1.44
CLK1-204ENST00000432425 ZC3H12AQ5D1E8 599 aaKnown RBP6.04□□□□□ -1.44
CLK1-204ENST00000432425 DUSP27Q5VZP5 1158 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 SCARA3Q6AZY7 606 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 SSU72Q9NP77 194 aaKnown RBP6.04□□□□□ -1.44
CLK1-204ENST00000432425 ZBTB7CA1YPR0 619 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 FAM170BA6NMN3 283 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 KIAA1324LA8MWY0 1029 aaPredicted RBP6.04□□□□□ -1.44
CLK1-204ENST00000432425 DYNC1LI2O43237 492 aaPredicted RBP6.04□□□□□ -1.44
CLK1-204ENST00000432425 MED26O95402 600 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 LMNB1P20700 586 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 DAB2P98082 770 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 SEZ6L2Q6UXD5 910 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 MPRIPQ6WCQ1 1025 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 FBXO33Q7Z6M2 555 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 SHISA5Q8N114 240 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 RNF214Q8ND24 703 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 GATA6Q92908 595 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 CACNA2D2Q9NY47 1150 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 PCOLCE2Q9UKZ9 415 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 PCDHA4Q9UN74 947 aa6.04□□□□□ -1.44
CLK1-204ENST00000432425 CYP26A1O43174 497 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 FOSL1P15407 271 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 HOXA10P31260 410 aaPredicted RBP6.03□□□□□ -1.44
CLK1-204ENST00000432425 ITGAEP38570 1179 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 TTBK2Q6IQ55 1244 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 ELMO3Q96BJ8 720 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 MRS2Q9HD23 443 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 C1GALT1Q9NS00 363 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 CSADQ9Y600 493 aa6.03□□□□□ -1.44
CLK1-204ENST00000432425 DCDC2CA8MYV0 355 aa6.02□□□□□ -1.45
CLK1-204ENST00000432425 NEFMP07197 916 aa6.02□□□□□ -1.45
CLK1-204ENST00000432425 RASIP1Q5U651 963 aa6.02□□□□□ -1.45
CLK1-204ENST00000432425 ZNF765Q7L2R6 523 aa6.02□□□□□ -1.45
CLK1-204ENST00000432425 TMC4Q7Z404 712 aa6.02□□□□□ -1.45
CLK1-204ENST00000432425 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.02□□□□□ -1.45
CLK1-204ENST00000432425 ISL2Q96A47 359 aa6.02□□□□□ -1.45
CLK1-204ENST00000432425 SPINK2P20155 84 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 CDK5R2Q13319 367 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 CYP27C1Q4G0S4 372 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 PPM1JQ5JR12 505 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 MEI1Q5TIA1 1274 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 OGFOD3Q6PK18 319 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 HOMEZQ8IX15 550 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 FAM161BQ96MY7 647 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 LRRC4CQ9HCJ2 640 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 SORBS3O60504 671 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 RPS26P62854 115 aaKnown RBP6.01□□□□□ -1.45
CLK1-204ENST00000432425 MAP3K11Q16584 847 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 C12orf40Q86WS4 652 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 DTX1Q86Y01 620 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 VTI1BQ9UEU0 232 aa6.01□□□□□ -1.45
CLK1-204ENST00000432425 FAM87AP0C7U9 286 aa6□□□□□ -1.45
CLK1-204ENST00000432425 TAF1CQ15572 869 aaPredicted RBP6□□□□□ -1.45
CLK1-204ENST00000432425 CDC37L1Q7L3B6 337 aa6□□□□□ -1.45
CLK1-204ENST00000432425 HDXQ7Z353 690 aa6□□□□□ -1.45
CLK1-204ENST00000432425 FANCGO15287 622 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 RLBP1P12271 317 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 LIG3P49916 1009 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 ST13P50502 369 aaKnown RBP5.99□□□□□ -1.45
CLK1-204ENST00000432425 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
CLK1-204ENST00000432425 TMCO4Q5TGY1 634 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 CRELD1Q96HD1 420 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 BCL2L13Q9BXK5 485 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 BCL11AQ9H165 835 aa5.99□□□□□ -1.45
CLK1-204ENST00000432425 ANGEL1Q9UNK9 670 aaKnown RBP5.99□□□□□ -1.45
CLK1-204ENST00000432425 PRAMEF27A3QJZ7 478 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 WNT11O96014 354 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 MSMPQ1L6U9 139 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 ZBTB37Q5TC79 503 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 DIEXFQ68CQ4 756 aaKnown RBP5.98□□□□□ -1.45
CLK1-204ENST00000432425 KCT2Q8NC54 265 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 GAL3ST3Q96A11 431 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 CTSHP09668 335 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 PTPN11Q06124 597 aaPredicted RBP5.98□□□□□ -1.45
CLK1-204ENST00000432425 SEPT6Q14141 434 aa5.98□□□□□ -1.45
CLK1-204ENST00000432425 ZNF326Q5BKZ1 582 aaKnown RBP5.98□□□□□ -1.45
CLK1-204ENST00000432425 WIPI1Q5MNZ9 446 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms