RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LMAN1P49257 510 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 MAP3K7CLP57077 242 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 CHMP4BP1P59074 171 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 TPM4P67936 248 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 RSRC2Q7L4I2 434 aaKnown RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC110Q8TBZ0 833 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 KIAA1524Q8TCG1 905 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 ATP6V0A1Q93050 837 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 SPDL1Q96EA4 605 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 DDX11Q96FC9 970 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 TRIM5Q9C035 493 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 FBXO2Q9UK22 296 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 EDARQ9UNE0 448 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 SPG7Q9UQ90 795 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 TMEM98Q9Y2Y6 226 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 BZW2Q9Y6E2 419 aaKnown RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 EEA1Q15075 1411 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 BTBD11A6QL63 1104 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 SLC3A2P08195 630 aaKnown RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 ZSCAN22P10073 491 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 ALOX15P16050 662 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 LETM2Q2VYF4 491 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 IL31Q6EBC2 164 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 POTEEQ6S8J3 1075 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC84Q86UT8 332 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 GAS2L3Q86XJ1 694 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 ZNF710Q8N1W2 664 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 C17orf53Q8N3J3 647 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 MSANTD4Q8NCY6 345 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 PRIMPOLQ96LW4 560 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 DKK3Q9UBP4 350 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 MTUS1Q9ULD2 1270 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 DDX11L8A8MPP1 907 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 KLHL41O60662 606 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 DNAJC6O75061 913 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 TBC1D8O95759 1140 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 RECKO95980 971 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 RPN1P04843 607 aaKnown RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 POTEIP0CG38 1075 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 PECAM1P16284 738 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ZFXP17010 805 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 POU5F1BQ06416 359 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 RALGDSQ12967 914 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 UBE4AQ14139 1066 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC57Q2TAC2 916 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 METTL24Q5JXM2 366 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 PACS1Q6VY07 963 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 TRIM50Q86XT4 487 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA5Q8TBA6 731 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CSRNP2Q9H175 543 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 SENP2Q9HC62 589 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ATF5Q9Y2D1 282 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 USH1CQ9Y6N9 552 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 SLC4A4Q9Y6R1 1079 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CECR2Q9BXF3 1484 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 A0A0B4J203 849 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ACSL4O60488 711 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 KRT14P02533 472 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 EIF4BP23588 611 aaKnown RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 LMOD1P29536 600 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 MYBPC3Q14896 1274 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ARHGEF6Q15052 776 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 RASA2Q15283 850 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 FIP1L1Q6UN15 594 aaKnown RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CENPQQ7L2Z9 268 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ARL6IP6Q8N6S5 226 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC63Q8NA47 563 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 APPBP2Q92624 585 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 TBC1D20Q96BZ9 403 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 PRKRIP1Q9H875 184 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 RHBDL2Q9NX52 303 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 SATB2Q9UPW6 733 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA8IPA6NC78 632 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ANKRD65E5RJM6 399 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ENPP1P22413 925 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 DNAJB2P25686 324 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CHKAP35790 457 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 MAPK9P45984 424 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 ATP2B2Q01814 1243 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CETN1Q12798 172 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 CUL4BQ13620 913 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 SLC7A5P1Q8MH63 180 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 GALNT6Q8NCL4 622 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 NACC2Q96BF6 587 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 AATFQ9NY61 560 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPN4-203ENST00000430976 AFG3L2Q9Y4W6 797 aa6.04□□□□□ -1.44
PTPN4-203ENST00000430976 C2orf81A6NN90 581 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 STXBP3O00186 592 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 P4HA2O15460 535 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 ONECUT3O60422 494 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 KRT13P13646 458 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 HSPA1LP34931 641 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SMAD1Q15797 465 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 PPP1R21Q6ZMI0 780 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 GOT1L1Q8NHS2 421 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 NR1H4Q96RI1 486 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 RIC8AQ9NPQ8 531 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 STARD7Q9NQZ5 370 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 PDRG1Q9NUG6 133 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms