RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
HOXC4-202ENST00000430889 FGRP09769 529 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 MSNP26038 577 aaKnown RBP16.25■□□□□ 0.19
HOXC4-202ENST00000430889 TPTE2Q6XPS3 522 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 FMR1NBQ8N0W7 255 aaPredicted RBP16.25■□□□□ 0.19
HOXC4-202ENST00000430889 GJD4Q96KN9 370 aaPredicted RBP16.25■□□□□ 0.19
HOXC4-202ENST00000430889 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 BRIP1Q9BX63 1249 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 ANKRD2Q9GZV1 360 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
HOXC4-202ENST00000430889 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
HOXC4-202ENST00000430889 IFNAR1P17181 557 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 SEC23AQ15436 765 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 FAM182BQ5T319 152 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 KRT40Q6A162 431 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 TDRD7Q8NHU6 1098 aaKnown RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 MYL10Q9BUA6 226 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 RAI14Q9P0K7 980 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 ABCF2Q9UG63 623 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 FMNL1O95466 1100 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 U2AF2P26368 475 aaKnown RBP eCLIP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 TMED8Q6PL24 325 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 CPLX2Q6PUV4 134 aaKnown RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 FSIP1Q8NA03 581 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 PHKBQ93100 1093 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 NSUN4Q96CB9 384 aaKnown RBP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 SLC12A7Q9Y666 1083 aa16.24■□□□□ 0.19
HOXC4-202ENST00000430889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
HOXC4-202ENST00000430889 OFD1O75665 1012 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 CAVIN2O95810 425 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
HOXC4-202ENST00000430889 ME1P48163 572 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 ANO1Q5XXA6 986 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
HOXC4-202ENST00000430889 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 SMIM22K7EJ46 135 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 SPTLC2O15270 562 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
HOXC4-202ENST00000430889 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
HOXC4-202ENST00000430889 WTAPQ15007 396 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 TMTC2Q8N394 836 aa16.22■□□□□ 0.19
HOXC4-202ENST00000430889 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
HOXC4-202ENST00000430889 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
HOXC4-202ENST00000430889 IQCB1Q15051 598 aa16.21■□□□□ 0.19
HOXC4-202ENST00000430889 STK38Q15208 465 aa16.21■□□□□ 0.19
HOXC4-202ENST00000430889 PTPAQ15257 358 aa16.21■□□□□ 0.19
HOXC4-202ENST00000430889 SASS6Q6UVJ0 657 aa16.21■□□□□ 0.19
HOXC4-202ENST00000430889 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
HOXC4-202ENST00000430889 MAP3K14Q99558 947 aa16.21■□□□□ 0.19
HOXC4-202ENST00000430889 UBE2Q2LH0YL09 131 aa16.21■□□□□ 0.18
HOXC4-202ENST00000430889 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.18
HOXC4-202ENST00000430889 MECOMQ03112 1051 aa16.21■□□□□ 0.18
HOXC4-202ENST00000430889 NFIXQ14938 502 aa16.21■□□□□ 0.18
HOXC4-202ENST00000430889 SART3Q15020 963 aaKnown RBP16.21■□□□□ 0.18
HOXC4-202ENST00000430889 SLC39A14Q15043 492 aa16.21■□□□□ 0.18
HOXC4-202ENST00000430889 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.18
HOXC4-202ENST00000430889 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.18
HOXC4-202ENST00000430889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.18
HOXC4-202ENST00000430889 FAM237AA0A1B0GTK4 181 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 IGSF3O75054 1194 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 NDUFA8P51970 172 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
HOXC4-202ENST00000430889 RTN1Q16799 776 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 RRP12Q5JTH9 1297 aaKnown RBP16.2■□□□□ 0.18
HOXC4-202ENST00000430889 TXNRD3Q86VQ6 643 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 ZNF654Q8IZM8 581 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.18
HOXC4-202ENST00000430889 DNAJC25Q9H1X3 360 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
HOXC4-202ENST00000430889 AFF2P51816 1311 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 BRWD3Q6RI45 1802 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 KINO60870 393 aaKnown RBP16.19■□□□□ 0.18
HOXC4-202ENST00000430889 PTMAP06454 111 aaKnown RBP16.19■□□□□ 0.18
HOXC4-202ENST00000430889 CMA1P23946 247 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 GUCY1A2P33402 732 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 ZNF165P49910 485 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 STX1AQ16623 288 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 C15orf52Q6ZUT6 534 aaKnown RBP16.19■□□□□ 0.18
HOXC4-202ENST00000430889 ESR2Q92731 530 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 SLC26A6Q9BXS9 759 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
HOXC4-202ENST00000430889 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 MROH7-TTC4A0A0A0MT08 1334 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
HOXC4-202ENST00000430889 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms