RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 TTC22Q5TAA0 569 aa6.67□□□□□ -1.34
UBR3-204ENST00000430321 ZNF449Q6P9G9 518 aa6.67□□□□□ -1.34
UBR3-204ENST00000430321 GADL1Q6ZQY3 521 aa6.67□□□□□ -1.34
UBR3-204ENST00000430321 MRPL50Q8N5N7 158 aaKnown RBP6.67□□□□□ -1.34
UBR3-204ENST00000430321 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBR3-204ENST00000430321 AGLP35573 1532 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 KIF1BO60333 1816 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 GSTTP1A0A1W2PQM5 241 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 CARNS1A5YM72 827 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 SLC1A4P43007 532 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 CTSWP56202 376 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 CKAP4Q07065 602 aaKnown RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 PDZD4Q76G19 769 aaPredicted RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 SLFN12Q8IYM2 578 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 IFT122Q9HBG6 1241 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 GPR108Q9NPR9 543 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 TET3O43151 1660 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 LOC102724428A0A0B4J2F2 783 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 ARHGEF35A5YM69 484 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 MARCKSP29966 332 aaPredicted RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 NASPP49321 788 aaPredicted RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 SIK1P57059 783 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 ZNF569Q5MCW4 686 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 RRAGBQ5VZM2 374 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 ALG1Q9BT22 464 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 EDEM3Q9BZQ6 932 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 TSPYL2Q9H2G4 693 aaPredicted RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 TOP1P11387 765 aaKnown RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 CFAP100Q494V2 611 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 TDRD12Q587J7 1177 aaKnown RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 DTHD1Q6ZMT9 781 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 SV2BQ7L1I2 683 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 LUZP1Q86V48 1076 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 SLC10A4Q96EP9 437 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 ATG3Q9NT62 314 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 USP40Q9NVE5 1235 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 KDRP35968 1356 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 ZNF233A6NK53 670 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 RPLP2P05387 115 aaKnown RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 CEBPZQ03701 1054 aaKnown RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 SREBF2Q12772 1141 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 MFSD14CQ5VZR4 134 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 SRGAP1Q7Z6B7 1085 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 DPP9Q86TI2 863 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 METTL23Q86XA0 190 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 ZBTB38Q8NAP3 1195 aaPredicted RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 TRIM47Q96LD4 638 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 SPAG5Q96R06 1193 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 LLPHQ9BRT6 129 aaKnown RBP6.66□□□□□ -1.34
UBR3-204ENST00000430321 COA1Q9GZY4 146 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 CCDC113Q9H0I3 377 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 MLXIPQ9HAP2 919 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 FAM8A1Q9UBU6 413 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 SLC8A2Q9UPR5 921 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 PTPRTO14522 1441 aa6.66□□□□□ -1.34
UBR3-204ENST00000430321 PTPDC1A2A3K4 754 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 CIAO1O76071 339 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 SERPINB2P05120 415 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 MICU3Q86XE3 530 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 ABI1Q8IZP0 508 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 NACA2Q9H009 215 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 ZNF277Q9NRM2 450 aaPredicted RBP6.65□□□□□ -1.34
UBR3-204ENST00000430321 SOS2Q07890 1332 aaPredicted RBP6.65□□□□□ -1.34
UBR3-204ENST00000430321 HOXC6P09630 235 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 PTPREP23469 700 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 SLC39A6Q13433 755 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 GSE1Q14687 1217 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 PDCL2Q8N4E4 241 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 AFAP1L2Q8N4X5 818 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 RAB3IL1Q8TBN0 382 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.65□□□□□ -1.34
UBR3-204ENST00000430321 V9GYY5 206 aaPredicted RBP6.65□□□□□ -1.34
UBR3-204ENST00000430321 GLI2P10070 1586 aa6.65□□□□□ -1.34
UBR3-204ENST00000430321 SFPQP23246 707 aaKnown RBP eCLIP6.65□□□□□ -1.35
UBR3-204ENST00000430321 ARID5AQ03989 594 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 CNNM4Q6P4Q7 775 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.65□□□□□ -1.35
UBR3-204ENST00000430321 MAIP1Q8WWC4 291 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.35
UBR3-204ENST00000430321 ADGRB3O60242 1522 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 RPS6KA4O75676 772 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 KIAA0754O94854 1291 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 GNA14O95837 355 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 POLR2MP0CAP2 368 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 SURF1Q15526 300 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 RILPL1Q5EBL4 403 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 SND1Q7KZF4 910 aaKnown RBP eCLIP6.65□□□□□ -1.35
UBR3-204ENST00000430321 NAP1L3Q99457 506 aaPredicted RBP6.65□□□□□ -1.35
UBR3-204ENST00000430321 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.35
UBR3-204ENST00000430321 ADCY10Q96PN6 1610 aa6.65□□□□□ -1.35
UBR3-204ENST00000430321 PTCH1Q13635 1447 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 RIOK3O14730 519 aaKnown RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 PRPF40AO75400 957 aaKnown RBP6.64□□□□□ -1.35
UBR3-204ENST00000430321 TRIM37O94972 964 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 TRIM14Q14142 442 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 VPS72Q15906 364 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 ARHGEF16Q5VV41 709 aa6.64□□□□□ -1.35
UBR3-204ENST00000430321 RIOK1Q9BRS2 568 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms