RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 DBNLQ9UJU6 430 aaKnown RBP20.8■□□□□ 0.92
UBE3D-204ENST00000430071 DDTLA6NHG4 134 aaPredicted RBP20.79■□□□□ 0.92
UBE3D-204ENST00000430071 SPDYE5A6NIY4 337 aa20.79■□□□□ 0.92
UBE3D-204ENST00000430071 RPAP2Q8IXW5 612 aaPredicted RBP20.79■□□□□ 0.92
UBE3D-204ENST00000430071 IDI2Q9BXS1 227 aa20.79■□□□□ 0.92
UBE3D-204ENST00000430071 ZNF341Q9BYN7 854 aa20.79■□□□□ 0.92
UBE3D-204ENST00000430071 ZNF112Q9UJU3 913 aa20.79■□□□□ 0.92
UBE3D-204ENST00000430071 DOCK1Q14185 1865 aa20.79■□□□□ 0.92
UBE3D-204ENST00000430071 GPR75-ASB3A0A0A6YYF3 556 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 CRHR2Q13324 411 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 PICALMQ13492 652 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 TTC39AQ5SRH9 613 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 DCAF15Q66K64 600 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 RAI14Q9P0K7 980 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 NDUFB9Q9Y6M9 179 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 HTTP42858 3142 aa20.78■□□□□ 0.92
UBE3D-204ENST00000430071 MYH1P12882 1939 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 CCL15-CCL14A0A0B4J2E2 113 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 IRF6O14896 467 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 FKTNO75072 461 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 ALDH1A1P00352 501 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 CYP2E1P05181 493 aaPredicted RBP20.77■□□□□ 0.92
UBE3D-204ENST00000430071 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 ZAP70P43403 619 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 CCL15Q16663 113 aa20.77■□□□□ 0.92
UBE3D-204ENST00000430071 NOM1Q5C9Z4 860 aaKnown RBP20.77■□□□□ 0.92
UBE3D-204ENST00000430071 ERO1BQ86YB8 467 aa20.76■□□□□ 0.91
UBE3D-204ENST00000430071 PIH1D3Q9NQM4 214 aaKnown RBP20.76■□□□□ 0.91
UBE3D-204ENST00000430071 TNRC18O15417 2968 aaPredicted RBP20.75■□□□□ 0.91
UBE3D-204ENST00000430071 ENTPD3O75355 529 aa20.75■□□□□ 0.91
UBE3D-204ENST00000430071 GTF2A2P52657 109 aa20.75■□□□□ 0.91
UBE3D-204ENST00000430071 ADGRA1Q86SQ6 560 aa20.75■□□□□ 0.91
UBE3D-204ENST00000430071 HOOK2Q96ED9 719 aa20.75■□□□□ 0.91
UBE3D-204ENST00000430071 LRP2BPQ9P2M1 347 aa20.75■□□□□ 0.91
UBE3D-204ENST00000430071 KIAA0100Q14667 2235 aaKnown RBP20.75■□□□□ 0.91
UBE3D-204ENST00000430071 CENPFP49454 3210 aa20.75■□□□□ 0.91
UBE3D-204ENST00000430071 PHF20L1A8MW92 1017 aa20.74■□□□□ 0.91
UBE3D-204ENST00000430071 CCDC158Q5M9N0 1113 aa20.74■□□□□ 0.91
UBE3D-204ENST00000430071 SLF2Q8IX21 1173 aa20.74■□□□□ 0.91
UBE3D-204ENST00000430071 IL1RAPL2Q9NP60 686 aa20.74■□□□□ 0.91
UBE3D-204ENST00000430071 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.74■□□□□ 0.91
UBE3D-204ENST00000430071 FAM196BA6NMK8 535 aa20.73■□□□□ 0.91
UBE3D-204ENST00000430071 PPIL2Q13356 520 aa20.73■□□□□ 0.91
UBE3D-204ENST00000430071 ZSCAN29Q8IWY8 852 aaPredicted RBP20.73■□□□□ 0.91
UBE3D-204ENST00000430071 HPS5Q9UPZ3 1129 aa20.73■□□□□ 0.91
UBE3D-204ENST00000430071 DOCK3Q8IZD9 2030 aa20.73■□□□□ 0.91
UBE3D-204ENST00000430071 BTBD19C9JJ37 291 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 APBB1O00213 710 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 HMMRO75330 724 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 AAMPQ13685 434 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 CD99L2Q8TCZ2 262 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 SH3RF3Q8TEJ3 882 aaPredicted RBP20.72■□□□□ 0.91
UBE3D-204ENST00000430071 PDE4DIPQ5VU43 2346 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 LDHCP07864 332 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 MAP3K10Q02779 954 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 TAF1CQ15572 869 aaPredicted RBP20.72■□□□□ 0.91
UBE3D-204ENST00000430071 OTUD7BQ6GQQ9 843 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 CCDC84Q86UT8 332 aaPredicted RBP20.72■□□□□ 0.91
UBE3D-204ENST00000430071 AACSQ86V21 672 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 ZNF512BQ96KM6 892 aaPredicted RBP20.72■□□□□ 0.91
UBE3D-204ENST00000430071 ANTXR1Q9H6X2 564 aa20.72■□□□□ 0.91
UBE3D-204ENST00000430071 AATFQ9NY61 560 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBE3D-204ENST00000430071 MGAMO43451 1857 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 SOX10P56693 466 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 GSTO1P78417 241 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 PPATQ06203 517 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 MOGSQ13724 837 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 NOL9Q5SY16 702 aaKnown RBP20.71■□□□□ 0.91
UBE3D-204ENST00000430071 NAA16Q6N069 864 aaPredicted RBP20.71■□□□□ 0.91
UBE3D-204ENST00000430071 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
UBE3D-204ENST00000430071 MYH7P12883 1935 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 CETPP11597 493 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 RGS19P49795 217 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 SNAPC2Q13487 334 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 RRP1BQ14684 758 aaKnown RBP20.7■□□□□ 0.9
UBE3D-204ENST00000430071 OTOP1Q7RTM1 612 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 TEX11Q8IYF3 940 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 TRIM17Q9Y577 477 aa20.7■□□□□ 0.9
UBE3D-204ENST00000430071 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
UBE3D-204ENST00000430071 KCNH4Q9UQ05 1017 aa20.69■□□□□ 0.9
UBE3D-204ENST00000430071 SP3Q02447 781 aa20.68■□□□□ 0.9
UBE3D-204ENST00000430071 FBXO46Q6PJ61 603 aaPredicted RBP20.68■□□□□ 0.9
UBE3D-204ENST00000430071 OSBPL5Q9H0X9 879 aaPredicted RBP20.68■□□□□ 0.9
UBE3D-204ENST00000430071 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
UBE3D-204ENST00000430071 PKN2Q16513 984 aaKnown RBP20.67■□□□□ 0.9
UBE3D-204ENST00000430071 SCYL3Q8IZE3 742 aa20.67■□□□□ 0.9
UBE3D-204ENST00000430071 ZFYVE28Q9HCC9 887 aa20.67■□□□□ 0.9
UBE3D-204ENST00000430071 ECM2O94769 699 aaPredicted RBP20.66■□□□□ 0.9
UBE3D-204ENST00000430071 PTPRAP18433 802 aa20.66■□□□□ 0.9
UBE3D-204ENST00000430071 PPP4CP60510 307 aa20.66■□□□□ 0.9
UBE3D-204ENST00000430071 ERC1Q8IUD2 1116 aa20.66■□□□□ 0.9
UBE3D-204ENST00000430071 MAPKAPK5Q8IW41 473 aa20.66■□□□□ 0.9
UBE3D-204ENST00000430071 TGFBRAP1Q8WUH2 860 aa20.66■□□□□ 0.9
UBE3D-204ENST00000430071 ZHX2Q9Y6X8 837 aa20.66■□□□□ 0.9
UBE3D-204ENST00000430071 IDH1O75874 414 aaKnown RBP20.65■□□□□ 0.9
UBE3D-204ENST00000430071 CYP7A1P22680 504 aa20.65■□□□□ 0.9
UBE3D-204ENST00000430071 HSP90AB4PQ58FF6 505 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms