RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 TCRBV5S4A2TA0A5A2 114 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 RAD21O60216 631 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 CHGBP05060 677 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 LDHBP07195 334 aaKnown RBP10.22□□□□□ -0.77
NUP98-207ENST00000429801 RBM25P49756 843 aaKnown RBP10.22□□□□□ -0.77
NUP98-207ENST00000429801 GTF2IP78347 998 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 SART3Q15020 963 aaKnown RBP10.22□□□□□ -0.77
NUP98-207ENST00000429801 TTLL5Q6EMB2 1281 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 NAA16Q6N069 864 aaPredicted RBP10.22□□□□□ -0.77
NUP98-207ENST00000429801 TMTC2Q8N394 836 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 OSBP2Q969R2 916 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 LSG1Q9H089 658 aaKnown RBP10.22□□□□□ -0.77
NUP98-207ENST00000429801 TAOK3Q9H2K8 898 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 DBNDD1Q9H9R9 158 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 JAG2Q9Y219 1238 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 ZKSCAN5Q9Y2L8 839 aa10.22□□□□□ -0.77
NUP98-207ENST00000429801 MYH7P12883 1935 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 MAST3O60307 1309 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 SOCS7O14512 581 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 ECE2O60344 883 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 GTF2F1P35269 517 aaKnown RBP eCLIP10.21□□□□□ -0.77
NUP98-207ENST00000429801 SLFNL1Q499Z3 407 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 ZNF589Q86UQ0 364 aaPredicted RBP10.21□□□□□ -0.77
NUP98-207ENST00000429801 DZIP1Q86YF9 867 aaKnown RBP10.21□□□□□ -0.77
NUP98-207ENST00000429801 PUS7LQ9H0K6 701 aaKnown RBP10.21□□□□□ -0.77
NUP98-207ENST00000429801 OGFRQ9NZT2 677 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 SUGT1Q9Y2Z0 365 aa10.21□□□□□ -0.77
NUP98-207ENST00000429801 PRDX5P30044 214 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 GSTO1P78417 241 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 CCDC96Q2M329 555 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 TSGA10IPQ3SY00 556 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 FBXW7Q969H0 707 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 AIDAQ96BJ3 306 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 NSUN4Q96CB9 384 aaKnown RBP10.21□□□□□ -0.78
NUP98-207ENST00000429801 SYT17Q9BSW7 474 aa10.21□□□□□ -0.78
NUP98-207ENST00000429801 ZNF277Q9NRM2 450 aaPredicted RBP10.21□□□□□ -0.78
NUP98-207ENST00000429801 GOLGB1Q14789 3259 aaKnown RBP10.2□□□□□ -0.78
NUP98-207ENST00000429801 M0R2C6 588 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 CYP7A1P22680 504 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
NUP98-207ENST00000429801 RBM5P52756 815 aaKnown RBP eCLIP10.2□□□□□ -0.78
NUP98-207ENST00000429801 HNRNPH2P55795 449 aaKnown RBP10.2□□□□□ -0.78
NUP98-207ENST00000429801 MECOMQ03112 1051 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 ZC3H12AQ5D1E8 599 aaKnown RBP10.2□□□□□ -0.78
NUP98-207ENST00000429801 STRIP1Q5VSL9 837 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 CCDC129Q6ZRS4 1044 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 MAP4K1Q92918 833 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 GPAA1O43292 621 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 ARMCX6Q7L4S7 300 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 SLF2Q8IX21 1173 aa10.2□□□□□ -0.78
NUP98-207ENST00000429801 MYO5AQ9Y4I1 1855 aaKnown RBP10.19□□□□□ -0.78
NUP98-207ENST00000429801 LTBP3Q9NS15 1303 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
NUP98-207ENST00000429801 LDHCP07864 332 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 FKBP1AP62942 108 aaKnown RBP10.19□□□□□ -0.78
NUP98-207ENST00000429801 PTH1RQ03431 593 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 HS1BP3Q53T59 392 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 DRC1Q96MC2 740 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 DSCC1Q9BVC3 393 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 CXorf56Q9H5V9 222 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 ARFGEF1Q9Y6D6 1849 aa10.19□□□□□ -0.78
NUP98-207ENST00000429801 GNAT2P19087 354 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 HSPA4P34932 840 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 NIM1KQ8IY84 436 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 RASSF4Q9H2L5 321 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 FER1L6Q2WGJ9 1857 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 MAST2Q6P0Q8 1798 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 CCDC88AQ3V6T2 1871 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 NFKBIEO00221 500 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
NUP98-207ENST00000429801 SSR1P43307 286 aaKnown RBP10.18□□□□□ -0.78
NUP98-207ENST00000429801 CCT2P78371 535 aaKnown RBP10.18□□□□□ -0.78
NUP98-207ENST00000429801 ZKSCAN8Q15776 578 aaPredicted RBP10.18□□□□□ -0.78
NUP98-207ENST00000429801 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 FEZ1Q99689 392 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
NUP98-207ENST00000429801 RPS6KL1Q9Y6S9 549 aa10.18□□□□□ -0.78
NUP98-207ENST00000429801 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
NUP98-207ENST00000429801 MBD4O95243 580 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
NUP98-207ENST00000429801 ZNF384Q8TF68 577 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 STRBPQ96SI9 672 aaKnown RBP10.17□□□□□ -0.78
NUP98-207ENST00000429801 ZNRF3Q9ULT6 936 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 CHD4Q14839 1912 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 BAG3O95817 575 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 ZKSCAN1P17029 563 aaPredicted RBP10.17□□□□□ -0.78
NUP98-207ENST00000429801 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 DACT2Q5SW24 774 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 LRCH2Q5VUJ6 765 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 ADGRA1Q86SQ6 560 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 MIGA1Q8NAN2 632 aa10.17□□□□□ -0.78
NUP98-207ENST00000429801 BRMS1Q9HCU9 246 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms