RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 ATP6V1AP38606 617 aa21.5■■□□□ 1.03
PDE6B-202ENST00000429163 PTPAQ15257 358 aa21.5■■□□□ 1.03
PDE6B-202ENST00000429163 OSBPL5Q9H0X9 879 aaPredicted RBP21.5■■□□□ 1.03
PDE6B-202ENST00000429163 TUBE1Q9UJT0 475 aa21.5■■□□□ 1.03
PDE6B-202ENST00000429163 PAXBP1Q9Y5B6 917 aa21.5■■□□□ 1.03
PDE6B-202ENST00000429163 BCL9LQ86UU0 1499 aa21.5■■□□□ 1.03
PDE6B-202ENST00000429163 PFKFB1P16118 471 aa21.5■■□□□ 1.03
PDE6B-202ENST00000429163 C17orf53Q8N3J3 647 aaPredicted RBP21.5■■□□□ 1.03
PDE6B-202ENST00000429163 GNL2Q13823 731 aaKnown RBP21.49■■□□□ 1.03
PDE6B-202ENST00000429163 SYCP1Q15431 976 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 BARGINQ6ZT62 677 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 TRIM22Q8IYM9 498 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 CACTINQ8WUQ7 758 aaKnown RBP21.49■■□□□ 1.03
PDE6B-202ENST00000429163 UBE2Q2Q8WVN8 375 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 MAP3K14Q99558 947 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 GNL3LQ9NVN8 582 aaKnown RBP21.49■■□□□ 1.03
PDE6B-202ENST00000429163 FAM13BQ9NYF5 915 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 NRBP1Q9UHY1 535 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 ERICH2A1L162 156 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 SYKP43405 635 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 SAFBQ15424 915 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDE6B-202ENST00000429163 MICU3Q86XE3 530 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 AOPEPQ8N6M6 819 aa21.49■■□□□ 1.03
PDE6B-202ENST00000429163 HELBQ8NG08 1087 aaPredicted RBP21.49■■□□□ 1.03
PDE6B-202ENST00000429163 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDE6B-202ENST00000429163 ECM29Q5VYK3 1845 aa21.48■■□□□ 1.03
PDE6B-202ENST00000429163 KAT6BQ8WYB5 2073 aa21.48■■□□□ 1.03
PDE6B-202ENST00000429163 KCNJ6P48051 423 aa21.48■■□□□ 1.03
PDE6B-202ENST00000429163 UBE4AQ14139 1066 aa21.48■■□□□ 1.03
PDE6B-202ENST00000429163 RESP18Q5W5W9 173 aa21.48■■□□□ 1.03
PDE6B-202ENST00000429163 FOXP1Q9H334 677 aaPredicted RBP21.48■■□□□ 1.03
PDE6B-202ENST00000429163 IGSF3O75054 1194 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 SF3B3Q15393 1217 aaKnown RBP21.47■■□□□ 1.03
PDE6B-202ENST00000429163 ARMT1Q9H993 441 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 CTIFO43310 598 aaKnown RBP21.47■■□□□ 1.03
PDE6B-202ENST00000429163 RANBP6O60518 1105 aaKnown RBP21.47■■□□□ 1.03
PDE6B-202ENST00000429163 PPFIA3O75145 1194 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 TDO2P48775 406 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 WTAPQ15007 396 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 CCDC144BQ3MJ40 725 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 CCDC144CPQ8IYA2 1237 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 SEC31BQ9NQW1 1179 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 HOOK1Q9UJC3 728 aaKnown RBP21.47■■□□□ 1.03
PDE6B-202ENST00000429163 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 NIP7Q9Y221 180 aaKnown RBP eCLIP21.47■■□□□ 1.03
PDE6B-202ENST00000429163 SLC4A4Q9Y6R1 1079 aa21.47■■□□□ 1.03
PDE6B-202ENST00000429163 WDHD1O75717 1129 aaPredicted RBP21.46■■□□□ 1.03
PDE6B-202ENST00000429163 DEXIO95424 95 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 CHRNDQ07001 517 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 LRMPQ12912 555 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 PDS5AQ29RF7 1337 aaKnown RBP21.46■■□□□ 1.03
PDE6B-202ENST00000429163 COL5A3P25940 1745 aaPredicted RBP21.46■■□□□ 1.03
PDE6B-202ENST00000429163 KIF2AO00139 706 aaPredicted RBP21.46■■□□□ 1.03
PDE6B-202ENST00000429163 SEMA3EO15041 775 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 NT5C2P49902 561 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 RTN1Q16799 776 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 RILPL1Q5EBL4 403 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 NOSTRINQ8IVI9 506 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 CCDC150Q8NCX0 1101 aa21.46■■□□□ 1.03
PDE6B-202ENST00000429163 MMP1P03956 469 aa21.45■■□□□ 1.02
PDE6B-202ENST00000429163 LRP2BPQ9P2M1 347 aa21.45■■□□□ 1.02
PDE6B-202ENST00000429163 TUBB4AP04350 444 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 DPCR1Q3MIW9 517 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 RAB11FIP4Q86YS3 637 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 LCORLQ8N3X6 602 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 ZNF579Q8NAF0 562 aaKnown RBP21.44■■□□□ 1.02
PDE6B-202ENST00000429163 PHKBQ93100 1093 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 GJB4Q9NTQ9 266 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 MYH14Q7Z406 1995 aaKnown RBP21.44■■□□□ 1.02
PDE6B-202ENST00000429163 SPATA31A5Q5VU36 1347 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 SPATA31A7Q8IWB4 1347 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 BCAMP50895 628 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 SLC26A6Q9BXS9 759 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 BSDC1Q9NW68 430 aaPredicted RBP21.44■■□□□ 1.02
PDE6B-202ENST00000429163 CEP131Q9UPN4 1083 aa21.44■■□□□ 1.02
PDE6B-202ENST00000429163 NRDCO43847 1150 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 RBM10P98175 930 aaKnown RBP21.43■■□□□ 1.02
PDE6B-202ENST00000429163 CTDSPL2Q05D32 466 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 ITPK1Q13572 414 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 SHC4Q6S5L8 630 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 KRI1Q8N9T8 703 aaKnown RBP21.43■■□□□ 1.02
PDE6B-202ENST00000429163 NKX2-3Q8TAU0 364 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 ESR2Q92731 530 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 AIFM3Q96NN9 605 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 SENP2Q9HC62 589 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 A0A1B0GUL6 1792 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 PPARAQ07869 468 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 CRACR2BQ8N4Y2 399 aaPredicted RBP21.43■■□□□ 1.02
PDE6B-202ENST00000429163 MARCH10Q8NA82 808 aaPredicted RBP21.43■■□□□ 1.02
PDE6B-202ENST00000429163 BRIP1Q9BX63 1249 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 RNF26Q9BY78 433 aaPredicted RBP21.43■■□□□ 1.02
PDE6B-202ENST00000429163 MROH7-TTC4A0A0A0MT08 1334 aa21.43■■□□□ 1.02
PDE6B-202ENST00000429163 NCAPHQ15003 741 aa21.42■■□□□ 1.02
PDE6B-202ENST00000429163 SLC10A5Q5PT55 438 aa21.42■■□□□ 1.02
PDE6B-202ENST00000429163 NBPF11Q86T75 865 aa21.42■■□□□ 1.02
PDE6B-202ENST00000429163 ANKRD18AQ8IVF6 992 aa21.42■■□□□ 1.02
PDE6B-202ENST00000429163 RIOK3O14730 519 aaKnown RBP21.41■■□□□ 1.02
PDE6B-202ENST00000429163 CBFA2T2O43439 604 aa21.41■■□□□ 1.02
PDE6B-202ENST00000429163 FGRP09769 529 aa21.41■■□□□ 1.02
PDE6B-202ENST00000429163 SKILP12757 684 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms