RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GBA2Q9HCG7 927 aaPredicted RBP17.55■□□□□ 0.4
SGCE-204ENST00000428696 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
SGCE-204ENST00000428696 UBE2Q2LH0YL09 131 aa17.54■□□□□ 0.4
SGCE-204ENST00000428696 TMED8Q6PL24 325 aaPredicted RBP17.54■□□□□ 0.4
SGCE-204ENST00000428696 LCORLQ8N3X6 602 aa17.54■□□□□ 0.4
SGCE-204ENST00000428696 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
SGCE-204ENST00000428696 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
SGCE-204ENST00000428696 DDX4Q9NQI0 724 aaKnown RBP17.54■□□□□ 0.4
SGCE-204ENST00000428696 ANGEL1Q9UNK9 670 aaKnown RBP17.54■□□□□ 0.4
SGCE-204ENST00000428696 PPP1R12BO60237 982 aaPredicted RBP17.53■□□□□ 0.4
SGCE-204ENST00000428696 ENTPD3O75355 529 aa17.53■□□□□ 0.4
SGCE-204ENST00000428696 APPP05067 770 aa17.53■□□□□ 0.4
SGCE-204ENST00000428696 ARMC9Q7Z3E5 817 aa17.53■□□□□ 0.4
SGCE-204ENST00000428696 APPBP2Q92624 585 aa17.53■□□□□ 0.4
SGCE-204ENST00000428696 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
SGCE-204ENST00000428696 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
SGCE-204ENST00000428696 HUNKP57058 714 aa17.52■□□□□ 0.4
SGCE-204ENST00000428696 TTC22Q5TAA0 569 aa17.52■□□□□ 0.4
SGCE-204ENST00000428696 CERS3Q8IU89 383 aa17.52■□□□□ 0.4
SGCE-204ENST00000428696 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
SGCE-204ENST00000428696 CSRNP1Q96S65 589 aa17.52■□□□□ 0.4
SGCE-204ENST00000428696 SLC4A4Q9Y6R1 1079 aa17.52■□□□□ 0.4
SGCE-204ENST00000428696 MYO5AQ9Y4I1 1855 aaKnown RBP17.52■□□□□ 0.39
SGCE-204ENST00000428696 PRKAB2O43741 272 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 SDR42E1Q8WUS8 393 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 HOOK2Q96ED9 719 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 TEPSINQ96N21 525 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 SEC62Q99442 399 aaKnown RBP17.51■□□□□ 0.39
SGCE-204ENST00000428696 RIOK1Q9BRS2 568 aaKnown RBP17.51■□□□□ 0.39
SGCE-204ENST00000428696 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 OSBPL5Q9H0X9 879 aaPredicted RBP17.51■□□□□ 0.39
SGCE-204ENST00000428696 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
SGCE-204ENST00000428696 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
SGCE-204ENST00000428696 SDSP20132 328 aa17.5■□□□□ 0.39
SGCE-204ENST00000428696 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
SGCE-204ENST00000428696 FLT1P17948 1338 aa17.5■□□□□ 0.39
SGCE-204ENST00000428696 M0R2C6 588 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 POLR3DP05423 398 aaPredicted RBP17.49■□□□□ 0.39
SGCE-204ENST00000428696 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
SGCE-204ENST00000428696 DEFB115Q30KQ5 88 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 SH3BP5LQ7L8J4 393 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 SAPCD2Q86UD0 394 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 FAM227BQ96M60 508 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 MCM9Q9NXL9 1143 aa17.49■□□□□ 0.39
SGCE-204ENST00000428696 GPAA1O43292 621 aa17.48■□□□□ 0.39
SGCE-204ENST00000428696 USP2O75604 605 aaPredicted RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 IREB2P48200 963 aaKnown RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 ZMYM1Q5SVZ6 1142 aa17.48■□□□□ 0.39
SGCE-204ENST00000428696 CWC27Q6UX04 472 aaKnown RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 CCDC129Q6ZRS4 1044 aa17.48■□□□□ 0.39
SGCE-204ENST00000428696 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 STRBPQ96SI9 672 aaKnown RBP17.48■□□□□ 0.39
SGCE-204ENST00000428696 TLL2Q9Y6L7 1015 aa17.48■□□□□ 0.39
SGCE-204ENST00000428696 FAM196BA6NMK8 535 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 HLA-DOAP06340 250 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 SLURP2P0DP57 97 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 FKBP1BP68106 108 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 SLC10A4Q96EP9 437 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
SGCE-204ENST00000428696 MCMDC2Q4G0Z9 681 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 AMOTL1Q8IY63 956 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 ZNF341Q9BYN7 854 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 DHX36Q9H2U1 1008 aaKnown RBP17.47■□□□□ 0.39
SGCE-204ENST00000428696 PI4KBQ9UBF8 816 aa17.47■□□□□ 0.39
SGCE-204ENST00000428696 HIP1O00291 1037 aa17.46■□□□□ 0.39
SGCE-204ENST00000428696 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
SGCE-204ENST00000428696 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
SGCE-204ENST00000428696 STK11IPQ8N1F8 1099 aa17.46■□□□□ 0.39
SGCE-204ENST00000428696 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
SGCE-204ENST00000428696 ATP8A2Q9NTI2 1148 aa17.46■□□□□ 0.39
SGCE-204ENST00000428696 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.38
SGCE-204ENST00000428696 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 GNAT2P19087 354 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 TDO2P48775 406 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
SGCE-204ENST00000428696 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
SGCE-204ENST00000428696 CSADQ9Y600 493 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 ECM29Q5VYK3 1845 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 DOCK2Q92608 1830 aa17.45■□□□□ 0.38
SGCE-204ENST00000428696 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 USP17L12C9JPN9 530 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 USP17L21D6R901 530 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 CYP2D6P10635 497 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 ANKRD13AQ8IZ07 590 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 ELP3Q9H9T3 547 aa17.44■□□□□ 0.38
SGCE-204ENST00000428696 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
SGCE-204ENST00000428696 CYP2D7A0A087X1C5 515 aa17.43■□□□□ 0.38
SGCE-204ENST00000428696 GSG1L2A8MUP6 293 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms