RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 EPHX2P34913 555 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 HSPA4P34932 840 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 TCP10Q12799 353 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 ALX1Q15699 326 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 IMMTQ16891 758 aaKnown RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 GIMAP6Q6P9H5 292 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZSCAN29Q8IWY8 852 aaPredicted RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZNF784Q8NCA9 323 aaPredicted RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZNF526Q8TF50 670 aaPredicted RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 DDX4Q9NQI0 724 aaKnown RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 GGA3Q9NZ52 723 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 ARPP21Q9UBL0 812 aaPredicted RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 DICER1Q9UPY3 1922 aaKnown RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 SBF1O95248 1867 aa9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 MYO5AQ9Y4I1 1855 aaKnown RBP9.42□□□□□ -0.9
HMGA1P4-201ENST00000428643 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 CYP2D7A0A087X1C5 515 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 USP17L21D6R901 530 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 CYP2D6P10635 497 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 TNNI2P48788 182 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 PPARAQ07869 468 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 ANGEL2Q5VTE6 544 aaKnown RBP9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 CTR9Q6PD62 1173 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 IDI2Q9BXS1 227 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 OSBPL5Q9H0X9 879 aaPredicted RBP9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 PALD1Q9ULE6 856 aa9.41□□□□□ -0.9
HMGA1P4-201ENST00000428643 ZNF213O14771 459 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 ENTPD3O75355 529 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 HLA-DOAP06340 250 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 SLC3A2P08195 630 aaKnown RBP9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 CYP21A2P08686 494 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 NECTIN1Q15223 517 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 FKBP1CQ5VVH2 108 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 TBC1D10CQ8IV04 446 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 STK11IPQ8N1F8 1099 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 TAF1DQ9H5J8 278 aaPredicted RBP9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 TAF6LQ9Y6J9 622 aa9.4□□□□□ -0.9
HMGA1P4-201ENST00000428643 CNTNAP1P78357 1384 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 MYH2Q9UKX2 1941 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 NPM3O75607 178 aaKnown RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 HIRAP54198 1017 aaPredicted RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 ANAPC15P60006 121 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 KRT32Q14532 448 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 SBK1Q52WX2 424 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 C12orf60Q5U649 245 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 USP50Q70EL3 339 aaPredicted RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 RALYLQ86SE5 291 aaKnown RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 ZFPM1Q8IX07 1006 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 JAKMIP1Q96N16 626 aaKnown RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 CSRNP1Q96S65 589 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 TOMM22Q9NS69 142 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 SCAF8Q9UPN6 1271 aaKnown RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 SNX14Q9Y5W7 946 aa9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 COL2A1P02458 1487 aaPredicted RBP9.39□□□□□ -0.91
HMGA1P4-201ENST00000428643 ATRNL1Q5VV63 1379 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 ROBO3Q96MS0 1386 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 E7EWF7 191 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 VEGFAP15692 232 aaPredicted RBP9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 EVX2Q03828 476 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 TRDNQ13061 729 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 RASA3Q14644 834 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 RRP12Q5JTH9 1297 aaKnown RBP9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 MFSD6Q6ZSS7 791 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 PNMA8AQ86V59 439 aaPredicted RBP9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 SULF1Q8IWU6 871 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 FAM151AQ8WW52 585 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 DCPSQ96C86 337 aaKnown RBP9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 DYNLL2Q96FJ2 89 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 TMEM39BQ9GZU3 492 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 DHX36Q9H2U1 1008 aaKnown RBP9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 RNF41Q9H4P4 317 aaPredicted RBP9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 RRAGCQ9HB90 399 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 NMRK2Q9NPI5 230 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 SERPINB13Q9UIV8 391 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 CEP350Q5VT06 3117 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
HMGA1P4-201ENST00000428643 NEDD4P46934 1319 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 PITPNM2Q9BZ72 1349 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 DDX60LQ5H9U9 1706 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms