RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 CERS5Q8N5B7 392 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 AGBL3Q8NEM8 1001 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 AATFQ9NY61 560 aaKnown RBP eCLIP10.71□□□□□ -0.69
NR1I3-209ENST00000428574 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 TAF6LQ9Y6J9 622 aa10.71□□□□□ -0.69
NR1I3-209ENST00000428574 PRC1O43663 620 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 PRKAB2O43741 272 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 DYNLL1P63167 89 aaKnown RBP10.7□□□□□ -0.7
NR1I3-209ENST00000428574 PDE4BQ07343 736 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 PPP2R5BQ15173 497 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 CTR9Q6PD62 1173 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 SGMS1Q86VZ5 419 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 ESR2Q92731 530 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 LLPHQ9BRT6 129 aaKnown RBP10.7□□□□□ -0.7
NR1I3-209ENST00000428574 DBNDD1Q9H9R9 158 aa10.7□□□□□ -0.7
NR1I3-209ENST00000428574 TTF2Q9UNY4 1162 aaKnown RBP10.7□□□□□ -0.7
NR1I3-209ENST00000428574 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
NR1I3-209ENST00000428574 MYH2Q9UKX2 1941 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 PSDA5PKW4 1024 aaPredicted RBP10.69□□□□□ -0.7
NR1I3-209ENST00000428574 DHX16O60231 1041 aaKnown RBP10.69□□□□□ -0.7
NR1I3-209ENST00000428574 RPS12P25398 132 aaKnown RBP10.69□□□□□ -0.7
NR1I3-209ENST00000428574 USP5P45974 858 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 HAND2P61296 217 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 FGD1P98174 961 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 TNIP1Q15025 636 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 GRIK5Q16478 980 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 C12orf60Q5U649 245 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 RSBN1LQ6PCB5 846 aaPredicted RBP10.69□□□□□ -0.7
NR1I3-209ENST00000428574 TEX11Q8IYF3 940 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 SDR42E1Q8WUS8 393 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 GMLQ99445 158 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 IDI2Q9BXS1 227 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 ANGEL1Q9UNK9 670 aaKnown RBP10.69□□□□□ -0.7
NR1I3-209ENST00000428574 KIF3AQ9Y496 699 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 FOCADQ5VW36 1801 aa10.69□□□□□ -0.7
NR1I3-209ENST00000428574 CHD4Q14839 1912 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 FLT1P17948 1338 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 YDJCA8MPS7 323 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 USP17L21D6R901 530 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 NFKBIEO00221 500 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 PFKFB2O60825 505 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 PDCP20941 246 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 CRKP46108 304 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 ANTXR2P58335 489 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 CLEC17AQ6ZS10 378 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 Q6ZUG5 572 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
NR1I3-209ENST00000428574 BRF1Q92994 677 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 GTF3C6Q969F1 213 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 JAG2Q9Y219 1238 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
NR1I3-209ENST00000428574 NEDD4P46934 1319 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 ERICH2A1L162 156 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 SH2B2O14492 632 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-209ENST00000428574 CPA1P15085 419 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
NR1I3-209ENST00000428574 ME3Q16798 604 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
NR1I3-209ENST00000428574 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 EHD4Q9H223 541 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 DHX36Q9H2U1 1008 aaKnown RBP10.67□□□□□ -0.7
NR1I3-209ENST00000428574 ZNF277Q9NRM2 450 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-209ENST00000428574 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
NR1I3-209ENST00000428574 SCN9AQ15858 1988 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 COL4A5P29400 1685 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 ATRNL1Q5VV63 1379 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 KDM4AO75164 1064 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 ENTPD3O75355 529 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 DSG3P32926 999 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 DPF2Q92785 391 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 UBAC1Q9BSL1 405 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 SLKQ9H2G2 1235 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-209ENST00000428574 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
NR1I3-209ENST00000428574 WDR33Q9C0J8 1336 aaKnown RBP10.65□□□□□ -0.7
NR1I3-209ENST00000428574 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
NR1I3-209ENST00000428574 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms