RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 FUCA2Q9BTY2 467 aa20.14■□□□□ 0.81
PRDM5-203ENST00000428209 DDX19AQ9NUU7 478 aaKnown RBP20.14■□□□□ 0.81
PRDM5-203ENST00000428209 IRS2Q9Y4H2 1338 aa20.14■□□□□ 0.81
PRDM5-203ENST00000428209 XDHP47989 1333 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 POLR3DP05423 398 aaPredicted RBP20.13■□□□□ 0.81
PRDM5-203ENST00000428209 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
PRDM5-203ENST00000428209 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 PDLIM2Q96JY6 352 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 MTA3Q9BTC8 594 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 RRAGDQ9NQL2 400 aaPredicted RBP20.13■□□□□ 0.81
PRDM5-203ENST00000428209 FAM217BQ9NTX9 383 aaPredicted RBP20.13■□□□□ 0.81
PRDM5-203ENST00000428209 AATFQ9NY61 560 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRDM5-203ENST00000428209 NR1I2O75469 434 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 NTRK3Q16288 839 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 TMTC2Q8N394 836 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 ESR2Q92731 530 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 TNMDQ9H2S6 317 aa20.13■□□□□ 0.81
PRDM5-203ENST00000428209 SMIM22K7EJ46 135 aa20.12■□□□□ 0.81
PRDM5-203ENST00000428209 AIFM3Q96NN9 605 aa20.12■□□□□ 0.81
PRDM5-203ENST00000428209 BRWD3Q6RI45 1802 aa20.12■□□□□ 0.81
PRDM5-203ENST00000428209 CYP2D7A0A087X1C5 515 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 SPTY2D1Q68D10 685 aaPredicted RBP20.11■□□□□ 0.81
PRDM5-203ENST00000428209 BRAPQ7Z569 592 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 CCDC192P0DO97 292 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 CRY2Q49AN0 593 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 RGS22Q8NE09 1264 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 CRNKL1Q9BZJ0 848 aaKnown RBP20.11■□□□□ 0.81
PRDM5-203ENST00000428209 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
PRDM5-203ENST00000428209 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
PRDM5-203ENST00000428209 BAZ2AQ9UIF9 1905 aaKnown RBP20.1■□□□□ 0.81
PRDM5-203ENST00000428209 CTR9Q6PD62 1173 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 DZIP1Q86YF9 867 aaKnown RBP20.1■□□□□ 0.81
PRDM5-203ENST00000428209 CLSTN2Q9H4D0 955 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 RTEL1Q9NZ71 1219 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 USP17L12C9JPN9 530 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 USP17L21D6R901 530 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 ZBTB22O15209 634 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 RANBP6O60518 1105 aaKnown RBP20.1■□□□□ 0.81
PRDM5-203ENST00000428209 ME1P48163 572 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 KIF23Q02241 960 aaPredicted RBP20.1■□□□□ 0.81
PRDM5-203ENST00000428209 SSRP1Q08945 709 aaKnown RBP20.1■□□□□ 0.81
PRDM5-203ENST00000428209 TXNRD1Q16881 649 aa20.1■□□□□ 0.81
PRDM5-203ENST00000428209 RBM17Q96I25 401 aaKnown RBP20.1■□□□□ 0.81
PRDM5-203ENST00000428209 ESPNB1AK53 854 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 RXRBP28702 533 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 RTN1Q16799 776 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 TMED8Q6PL24 325 aaPredicted RBP20.09■□□□□ 0.81
PRDM5-203ENST00000428209 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
PRDM5-203ENST00000428209 CKAP2LQ8IYA6 745 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 WDR66Q8TBY9 1149 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 SLC26A6Q9BXS9 759 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 KIF28PB7ZC32 967 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 GPSM2P81274 684 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 KRT40Q6A162 431 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 ZNF804AQ7Z570 1209 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 PROM2Q8N271 834 aa20.09■□□□□ 0.81
PRDM5-203ENST00000428209 TDRD7Q8NHU6 1098 aaKnown RBP20.09■□□□□ 0.81
PRDM5-203ENST00000428209 GPR101Q96P66 508 aaPredicted RBP20.09■□□□□ 0.81
PRDM5-203ENST00000428209 TNKSO95271 1327 aa20.08■□□□□ 0.81
PRDM5-203ENST00000428209 IFNAR1P17181 557 aa20.08■□□□□ 0.81
PRDM5-203ENST00000428209 TRIM29Q14134 588 aa20.08■□□□□ 0.81
PRDM5-203ENST00000428209 DCP1AQ9NPI6 582 aaPredicted RBP20.08■□□□□ 0.81
PRDM5-203ENST00000428209 ATP8A2Q9NTI2 1148 aa20.08■□□□□ 0.81
PRDM5-203ENST00000428209 CCDC88AQ3V6T2 1871 aa20.08■□□□□ 0.81
PRDM5-203ENST00000428209 LDHBP07195 334 aaKnown RBP20.08■□□□□ 0.8
PRDM5-203ENST00000428209 DDR1Q08345 913 aa20.08■□□□□ 0.8
PRDM5-203ENST00000428209 ZNF654Q8IZM8 581 aa20.08■□□□□ 0.8
PRDM5-203ENST00000428209 NUP133Q8WUM0 1156 aa20.08■□□□□ 0.8
PRDM5-203ENST00000428209 CLIC4Q9Y696 253 aa20.08■□□□□ 0.8
PRDM5-203ENST00000428209 NID2Q14112 1375 aa20.08■□□□□ 0.8
PRDM5-203ENST00000428209 PRDM1O75626 825 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 FMNL1O95466 1100 aaPredicted RBP20.07■□□□□ 0.8
PRDM5-203ENST00000428209 PCP11498 1178 aaKnown RBP20.07■□□□□ 0.8
PRDM5-203ENST00000428209 STK38Q15208 465 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 LINC00301Q8NCQ3 95 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 POLR3EQ9NVU0 708 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 STK36Q9NRP7 1315 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 CCDC196A0A1B0GTZ2 297 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 UFL1O94874 794 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 GNL2Q13823 731 aaKnown RBP20.07■□□□□ 0.8
PRDM5-203ENST00000428209 SEC23AQ15436 765 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 SF3A1Q15459 793 aaKnown RBP20.07■□□□□ 0.8
PRDM5-203ENST00000428209 CCDC73Q6ZRK6 1079 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 ZSCAN10Q96SZ4 725 aaPredicted RBP20.07■□□□□ 0.8
PRDM5-203ENST00000428209 PCDHA7Q9UN72 937 aa20.07■□□□□ 0.8
PRDM5-203ENST00000428209 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
PRDM5-203ENST00000428209 FGRP09769 529 aa20.06■□□□□ 0.8
PRDM5-203ENST00000428209 HMGB2P26583 209 aaKnown RBP20.06■□□□□ 0.8
PRDM5-203ENST00000428209 RCAN1P53805 252 aa20.06■□□□□ 0.8
PRDM5-203ENST00000428209 TYRO3Q06418 890 aa20.06■□□□□ 0.8
PRDM5-203ENST00000428209 RBM43Q6ZSC3 357 aaKnown RBP20.06■□□□□ 0.8
PRDM5-203ENST00000428209 C15orf52Q6ZUT6 534 aaKnown RBP20.06■□□□□ 0.8
PRDM5-203ENST00000428209 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
PRDM5-203ENST00000428209 FANCBQ8NB91 859 aa20.06■□□□□ 0.8
PRDM5-203ENST00000428209 WASF1Q92558 559 aa20.06■□□□□ 0.8
PRDM5-203ENST00000428209 MYH2Q9UKX2 1941 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms