RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CCDC158Q5M9N0 1113 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 SH3BP5LQ7L8J4 393 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 FAM43AQ8N2R8 423 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 CCDC8Q9H0W5 538 aaPredicted RBP22.6■■□□□ 1.21
PSPC1-202ENST00000427943 LRP2BPQ9P2M1 347 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 ZNF112Q9UJU3 913 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 DBNLQ9UJU6 430 aaKnown RBP22.6■■□□□ 1.21
PSPC1-202ENST00000427943 RCAN3Q9UKA8 241 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 HPS5Q9UPZ3 1129 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 EXOC6BQ9Y2D4 811 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 COG6Q9Y2V7 657 aa22.6■■□□□ 1.21
PSPC1-202ENST00000427943 RHBDL3P58872 404 aa22.59■■□□□ 1.21
PSPC1-202ENST00000427943 GSTO1P78417 241 aa22.59■■□□□ 1.21
PSPC1-202ENST00000427943 PPIL2Q13356 520 aa22.59■■□□□ 1.21
PSPC1-202ENST00000427943 TAF1CQ15572 869 aaPredicted RBP22.59■■□□□ 1.21
PSPC1-202ENST00000427943 PKN2Q16513 984 aaKnown RBP22.59■■□□□ 1.21
PSPC1-202ENST00000427943 DDTLA6NHG4 134 aaPredicted RBP22.58■■□□□ 1.21
PSPC1-202ENST00000427943 LDHCP07864 332 aa22.58■■□□□ 1.21
PSPC1-202ENST00000427943 SLURP2P0DP57 97 aa22.58■■□□□ 1.21
PSPC1-202ENST00000427943 EAF2Q96CJ1 260 aaPredicted RBP22.58■■□□□ 1.21
PSPC1-202ENST00000427943 SIPA1L1O43166 1804 aa22.58■■□□□ 1.21
PSPC1-202ENST00000427943 CETPP11597 493 aa22.57■■□□□ 1.2
PSPC1-202ENST00000427943 SOX10P56693 466 aa22.57■■□□□ 1.2
PSPC1-202ENST00000427943 PPATQ06203 517 aa22.57■■□□□ 1.2
PSPC1-202ENST00000427943 SNAPC2Q13487 334 aa22.57■■□□□ 1.2
PSPC1-202ENST00000427943 CD99L2Q8TCZ2 262 aa22.57■■□□□ 1.2
PSPC1-202ENST00000427943 CYP2E1P05181 493 aaPredicted RBP22.56■■□□□ 1.2
PSPC1-202ENST00000427943 ZAP70P43403 619 aa22.56■■□□□ 1.2
PSPC1-202ENST00000427943 NOL9Q5SY16 702 aaKnown RBP22.56■■□□□ 1.2
PSPC1-202ENST00000427943 FBXO46Q6PJ61 603 aaPredicted RBP22.56■■□□□ 1.2
PSPC1-202ENST00000427943 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.56■■□□□ 1.2
PSPC1-202ENST00000427943 TRIM17Q9Y577 477 aa22.56■■□□□ 1.2
PSPC1-202ENST00000427943 BTBD19C9JJ37 291 aa22.55■■□□□ 1.2
PSPC1-202ENST00000427943 ERO1AQ96HE7 468 aa22.55■■□□□ 1.2
PSPC1-202ENST00000427943 ZFYVE28Q9HCC9 887 aa22.55■■□□□ 1.2
PSPC1-202ENST00000427943 DDX19BQ9UMR2 479 aa22.55■■□□□ 1.2
PSPC1-202ENST00000427943 PHF20L1A8MW92 1017 aa22.54■■□□□ 1.2
PSPC1-202ENST00000427943 RGS19P49795 217 aa22.54■■□□□ 1.2
PSPC1-202ENST00000427943 SP3Q02447 781 aa22.54■■□□□ 1.2
PSPC1-202ENST00000427943 NAA16Q6N069 864 aaPredicted RBP22.54■■□□□ 1.2
PSPC1-202ENST00000427943 OTOP1Q7RTM1 612 aa22.54■■□□□ 1.2
PSPC1-202ENST00000427943 ERC1Q8IUD2 1116 aa22.54■■□□□ 1.2
PSPC1-202ENST00000427943 ZNF512BQ96KM6 892 aaPredicted RBP22.54■■□□□ 1.2
PSPC1-202ENST00000427943 PIH1D3Q9NQM4 214 aaKnown RBP22.54■■□□□ 1.2
PSPC1-202ENST00000427943 MYH1P12882 1939 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 FAM196BA6NMK8 535 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 CAP1Q01518 475 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 AACSQ86V21 672 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 TEX11Q8IYF3 940 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 SH3RF3Q8TEJ3 882 aaPredicted RBP22.53■■□□□ 1.2
PSPC1-202ENST00000427943 NOL10Q9BSC4 688 aaKnown RBP22.53■■□□□ 1.2
PSPC1-202ENST00000427943 IL1RAPL2Q9NP60 686 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 COL2A1P02458 1487 aaPredicted RBP22.53■■□□□ 1.2
PSPC1-202ENST00000427943 HTTP42858 3142 aa22.53■■□□□ 1.2
PSPC1-202ENST00000427943 APBB1O00213 710 aa22.52■■□□□ 1.2
PSPC1-202ENST00000427943 MLLT1Q03111 559 aaPredicted RBP22.52■■□□□ 1.2
PSPC1-202ENST00000427943 ADGRA1Q86SQ6 560 aa22.52■■□□□ 1.2
PSPC1-202ENST00000427943 SCYL3Q8IZE3 742 aa22.52■■□□□ 1.2
PSPC1-202ENST00000427943 OSBPL5Q9H0X9 879 aaPredicted RBP22.52■■□□□ 1.2
PSPC1-202ENST00000427943 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
PSPC1-202ENST00000427943 AATFQ9NY61 560 aaKnown RBP eCLIP22.52■■□□□ 1.2
PSPC1-202ENST00000427943 KCNH4Q9UQ05 1017 aa22.52■■□□□ 1.2
PSPC1-202ENST00000427943 NDUFB9Q9Y6M9 179 aa22.52■■□□□ 1.2
PSPC1-202ENST00000427943 C20orf194Q5TEA3 1177 aa22.51■■□□□ 1.19
PSPC1-202ENST00000427943 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.51■■□□□ 1.19
PSPC1-202ENST00000427943 NPM3O75607 178 aaKnown RBP22.5■■□□□ 1.19
PSPC1-202ENST00000427943 MAP4K4O95819 1239 aaPredicted RBP22.5■■□□□ 1.19
PSPC1-202ENST00000427943 MAP3K10Q02779 954 aa22.5■■□□□ 1.19
PSPC1-202ENST00000427943 HSP90AB4PQ58FF6 505 aa22.5■■□□□ 1.19
PSPC1-202ENST00000427943 SIRT2Q8IXJ6 389 aa22.5■■□□□ 1.19
PSPC1-202ENST00000427943 RHPN1Q8TCX5 695 aa22.5■■□□□ 1.19
PSPC1-202ENST00000427943 ZCCHC17Q9NP64 241 aaKnown RBP22.5■■□□□ 1.19
PSPC1-202ENST00000427943 PICK1Q9NRD5 415 aa22.5■■□□□ 1.19
PSPC1-202ENST00000427943 TNRC18O15417 2968 aaPredicted RBP22.5■■□□□ 1.19
PSPC1-202ENST00000427943 PTPRAP18433 802 aa22.49■■□□□ 1.19
PSPC1-202ENST00000427943 RPAP2Q8IXW5 612 aaPredicted RBP22.49■■□□□ 1.19
PSPC1-202ENST00000427943 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
PSPC1-202ENST00000427943 EFCC1Q9HA90 598 aa22.49■■□□□ 1.19
PSPC1-202ENST00000427943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.49■■□□□ 1.19
PSPC1-202ENST00000427943 MGAMO43451 1857 aa22.49■■□□□ 1.19
PSPC1-202ENST00000427943 PDHXO00330 501 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 TLR2O60603 784 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 HMMRO75330 724 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 IDH1O75874 414 aaKnown RBP22.48■■□□□ 1.19
PSPC1-202ENST00000427943 BAG3O95817 575 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 MOGSQ13724 837 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 ANKRD23Q86SG2 305 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 CCDC84Q86UT8 332 aaPredicted RBP22.48■■□□□ 1.19
PSPC1-202ENST00000427943 ZHX2Q9Y6X8 837 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 LOC285556D6RIA3 1793 aa22.48■■□□□ 1.19
PSPC1-202ENST00000427943 MAPKAPK5Q8IW41 473 aa22.47■■□□□ 1.19
PSPC1-202ENST00000427943 ANTXR1Q9H6X2 564 aa22.47■■□□□ 1.19
PSPC1-202ENST00000427943 PTPN22Q9Y2R2 807 aa22.47■■□□□ 1.19
PSPC1-202ENST00000427943 RBBP6Q7Z6E9 1792 aaKnown RBP22.47■■□□□ 1.19
PSPC1-202ENST00000427943 NAV1Q8NEY1 1877 aa22.47■■□□□ 1.19
PSPC1-202ENST00000427943 CTNND1O60716 968 aaKnown RBP22.46■■□□□ 1.19
PSPC1-202ENST00000427943 PLCG2P16885 1265 aa22.46■■□□□ 1.19
PSPC1-202ENST00000427943 CYP7A1P22680 504 aa22.46■■□□□ 1.19
PSPC1-202ENST00000427943 DYNLL1P63167 89 aaKnown RBP22.46■■□□□ 1.19
PSPC1-202ENST00000427943 TGFBRAP1Q8WUH2 860 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms