RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SNX27Q96L92 541 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 UHRF1Q96T88 793 aaPredicted RBP11.76□□□□□ -0.53
LSG1-202ENST00000427461 PCGF6Q9BYE7 350 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
LSG1-202ENST00000427461 CCND3P30281 292 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 HIBADHP31937 336 aaKnown RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 CHAF1AQ13111 956 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 FAM110CQ1W6H9 321 aa11.75□□□□□ -0.53
LSG1-202ENST00000427461 FKBP1CQ5VVH2 108 aa11.75□□□□□ -0.53
LSG1-202ENST00000427461 LHX8Q68G74 356 aa11.75□□□□□ -0.53
LSG1-202ENST00000427461 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 FAM84BQ96KN1 310 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
LSG1-202ENST00000427461 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 ASB2Q96Q27 587 aa11.75□□□□□ -0.53
LSG1-202ENST00000427461 SENP6Q9GZR1 1112 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.75□□□□□ -0.53
LSG1-202ENST00000427461 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
LSG1-202ENST00000427461 FRMPD3Q5JV73 1810 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 TCF20Q9UGU0 1960 aaKnown RBP11.74□□□□□ -0.53
LSG1-202ENST00000427461 SLURP2P0DP57 97 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 PTPRAP18433 802 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
LSG1-202ENST00000427461 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 TREML2Q5T2D2 321 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
LSG1-202ENST00000427461 ALYREFQ86V81 257 aaKnown RBP11.74□□□□□ -0.53
LSG1-202ENST00000427461 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 ATXN2LQ8WWM7 1075 aaKnown RBP11.74□□□□□ -0.53
LSG1-202ENST00000427461 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
LSG1-202ENST00000427461 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
LSG1-202ENST00000427461 NFIAQ12857 509 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 GCKRQ14397 625 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 BADQ92934 168 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 LRFN3Q9BTN0 628 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
LSG1-202ENST00000427461 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 PEX10O60683 326 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 IFIT5Q13325 482 aaKnown RBP11.72□□□□□ -0.53
LSG1-202ENST00000427461 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 SCYL3Q8IZE3 742 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 PRKAG2Q9UGJ0 569 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 AGTPBP1Q9UPW5 1226 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 HCN4Q9Y3Q4 1203 aa11.72□□□□□ -0.53
LSG1-202ENST00000427461 RTP1P59025 263 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 FOXO4P98177 505 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 CCL14Q16627 93 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 LDHAL6AQ6ZMR3 332 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
LSG1-202ENST00000427461 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
LSG1-202ENST00000427461 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
LSG1-202ENST00000427461 NCOR1O75376 2440 aa11.71□□□□□ -0.54
LSG1-202ENST00000427461 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
LSG1-202ENST00000427461 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
LSG1-202ENST00000427461 G2E3Q7L622 706 aa11.7□□□□□ -0.54
LSG1-202ENST00000427461 EPHX3Q9H6B9 360 aa11.7□□□□□ -0.54
LSG1-202ENST00000427461 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
LSG1-202ENST00000427461 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
LSG1-202ENST00000427461 REV3LO60673 3130 aa11.7□□□□□ -0.54
LSG1-202ENST00000427461 XIRP2A4UGR9 3374 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 UBE4AQ14139 1066 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 CDC42EP5Q6NZY7 148 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 MRIQ9BWK5 157 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 ZNF576Q9H609 170 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
LSG1-202ENST00000427461 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
LSG1-202ENST00000427461 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
LSG1-202ENST00000427461 DNAJB2P25686 324 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 EPHB4P54760 987 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 CCDC30Q5VVM6 783 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 HHIPL2Q6UWX4 724 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 LMBR1LQ6UX01 489 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 FBXO33Q7Z6M2 555 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 TBC1D22AQ8WUA7 517 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 RNPC3Q96LT9 517 aaKnown RBP11.68□□□□□ -0.54
LSG1-202ENST00000427461 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 PUS3Q9BZE2 481 aaKnown RBP11.68□□□□□ -0.54
LSG1-202ENST00000427461 DAGLAQ9Y4D2 1042 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 RLFQ13129 1914 aa11.68□□□□□ -0.54
LSG1-202ENST00000427461 XRCC5P13010 732 aaKnown RBP11.67□□□□□ -0.54
LSG1-202ENST00000427461 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms