RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 PDE4CQ08493 712 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 TSC1Q92574 1164 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 ZNF646O15015 1829 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-204ENST00000427414 ORC4O43929 436 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 LDHBP07195 334 aaKnown RBP9.99□□□□□ -0.81
SH3D19-204ENST00000427414 SOGA3Q5TF21 947 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
SH3D19-204ENST00000427414 GAKO14976 1311 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 A0A0U1RQG5 324 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 UFL1O94874 794 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 MECOMQ03112 1051 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 DMTNQ08495 405 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 SYAP1Q96A49 352 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 ZNF830Q96NB3 372 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 NAV1Q8NEY1 1877 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 STX6O43752 255 aa9.98□□□□□ -0.81
SH3D19-204ENST00000427414 NPM3O75607 178 aaKnown RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 ZSCAN22P10073 491 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 SART3Q15020 963 aaKnown RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 EZH2Q15910 746 aaKnown RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 NOL10Q9BSC4 688 aaKnown RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 ANGEL1Q9UNK9 670 aaKnown RBP9.98□□□□□ -0.81
SH3D19-204ENST00000427414 GPR75-ASB3A0A0A6YYF3 556 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 CDKL5O76039 1030 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 CBX1P83916 185 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 UTP14CQ5TAP6 766 aaKnown RBP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 MFSD6Q6ZSS7 791 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 LCORLQ8N3X6 602 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 PRIMPOLQ96LW4 560 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 MAP3K14Q99558 947 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 ZSCAN16Q9H4T2 348 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 EPB41L4AQ9HCS5 686 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 MROH7-TTC4A0A0A0MT08 1334 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 PRC1O43663 620 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 NOLC1Q14978 699 aaKnown RBP eCLIP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-204ENST00000427414 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 STK36Q9NRP7 1315 aa9.97□□□□□ -0.81
SH3D19-204ENST00000427414 CDK5RAP2Q96SN8 1893 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 MYO3BQ8WXR4 1341 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 SNAP23O00161 211 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 SH2B2O14492 632 aaPredicted RBP9.96□□□□□ -0.81
SH3D19-204ENST00000427414 CHGBP05060 677 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 PPARAQ07869 468 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 DZIP1Q86YF9 867 aaKnown RBP9.96□□□□□ -0.81
SH3D19-204ENST00000427414 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 ESR2Q92731 530 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 ARMT1Q9H993 441 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 ABCF2Q9UG63 623 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 POLLQ9UGP5 575 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.81
SH3D19-204ENST00000427414 MYH2Q9UKX2 1941 aa9.96□□□□□ -0.81
SH3D19-204ENST00000427414 COL2A1P02458 1487 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-204ENST00000427414 APPP05067 770 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 GJB2P29033 226 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 PDIA3P30101 505 aaKnown RBP9.96□□□□□ -0.82
SH3D19-204ENST00000427414 TDO2P48775 406 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 TGFB2P61812 414 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 FGD1P98174 961 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 ST3GAL1Q11201 340 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 CPLX2Q6PUV4 134 aaKnown RBP9.96□□□□□ -0.82
SH3D19-204ENST00000427414 C2CD5Q86YS7 1000 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 C7orf43Q8WVR3 580 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 ANKS1AQ92625 1134 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 ZC3H12CQ9C0D7 883 aaKnown RBP9.96□□□□□ -0.82
SH3D19-204ENST00000427414 TCP11L1Q9NUJ3 509 aa9.96□□□□□ -0.82
SH3D19-204ENST00000427414 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 CALM1P0DP23 149 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 CALM2P0DP24 149 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 CALM3P0DP25 149 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 SYT1P21579 422 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 EN1Q05925 392 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-204ENST00000427414 HHIPL2Q6UWX4 724 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 DPP8Q6V1X1 898 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-204ENST00000427414 CCDC83Q8IWF9 413 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 ZNF384Q8TF68 577 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 BRF1Q92994 677 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.95□□□□□ -0.82
SH3D19-204ENST00000427414 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 MYH15Q9Y2K3 1946 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 F13A1P00488 732 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 ANTXR2P58335 489 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 TTLL5Q6EMB2 1281 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 NOL8Q76FK4 1167 aaKnown RBP9.95□□□□□ -0.82
SH3D19-204ENST00000427414 TXNRD3Q86VQ6 643 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 PSMD1Q99460 953 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 TTC12Q9H892 705 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-204ENST00000427414 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
SH3D19-204ENST00000427414 USP25Q9UHP3 1055 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms