RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 NARFQ9UHQ1 456 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 BICDL1Q6ZP65 573 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.35■■□□□ 1.17
SNX17-202ENST00000427123 MYL10Q9BUA6 226 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 ANO10Q9NW15 660 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 ABCF2Q9UG63 623 aa22.35■■□□□ 1.17
SNX17-202ENST00000427123 FMNL1O95466 1100 aaPredicted RBP22.34■■□□□ 1.17
SNX17-202ENST00000427123 RCAN1P53805 252 aa22.34■■□□□ 1.17
SNX17-202ENST00000427123 PPARAQ07869 468 aa22.34■■□□□ 1.17
SNX17-202ENST00000427123 SSRP1Q08945 709 aaKnown RBP22.34■■□□□ 1.17
SNX17-202ENST00000427123 WTAPQ15007 396 aa22.34■■□□□ 1.17
SNX17-202ENST00000427123 RRP12Q5JTH9 1297 aaKnown RBP22.34■■□□□ 1.17
SNX17-202ENST00000427123 ADGRA1Q86SQ6 560 aa22.34■■□□□ 1.17
SNX17-202ENST00000427123 PLA2G4DQ86XP0 818 aa22.34■■□□□ 1.17
SNX17-202ENST00000427123 WASF1Q92558 559 aa22.34■■□□□ 1.17
SNX17-202ENST00000427123 A0A1B0GVL5 298 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 ERICH2A1L162 156 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 SEMA3EO15041 775 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 RPS6KA4O75676 772 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 ZNF75DP51815 510 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 NDUFA8P51970 172 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 KCNQ4P56696 695 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 IQCB1Q15051 598 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 C11orf57Q6ZUT1 292 aaPredicted RBP22.33■■□□□ 1.17
SNX17-202ENST00000427123 SPC24Q8NBT2 197 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 TOMM22Q9NS69 142 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 ANAPC4Q9UJX5 808 aa22.33■■□□□ 1.17
SNX17-202ENST00000427123 MAST2Q6P0Q8 1798 aa22.33■■□□□ 1.16
SNX17-202ENST00000427123 IFNAR1P17181 557 aa22.33■■□□□ 1.16
SNX17-202ENST00000427123 GNL2Q13823 731 aaKnown RBP22.33■■□□□ 1.16
SNX17-202ENST00000427123 SLC39A14Q15043 492 aa22.33■■□□□ 1.16
SNX17-202ENST00000427123 TMTC2Q8N394 836 aa22.33■■□□□ 1.16
SNX17-202ENST00000427123 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.16
SNX17-202ENST00000427123 GOLGA6L19H0YKK7 550 aa22.32■■□□□ 1.16
SNX17-202ENST00000427123 RIOK1Q9BRS2 568 aaKnown RBP22.32■■□□□ 1.16
SNX17-202ENST00000427123 SLC26A6Q9BXS9 759 aa22.32■■□□□ 1.16
SNX17-202ENST00000427123 DUOX1Q9NRD9 1551 aa22.32■■□□□ 1.16
SNX17-202ENST00000427123 PDS5AQ29RF7 1337 aaKnown RBP22.31■■□□□ 1.16
SNX17-202ENST00000427123 U2AF2P26368 475 aaKnown RBP eCLIP22.31■■□□□ 1.164e-7■■■■■ 30.7
SNX17-202ENST00000427123 RTN1Q16799 776 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 FAM84BQ96KN1 310 aaPredicted RBP22.31■■□□□ 1.16
SNX17-202ENST00000427123 SETDB2Q96T68 719 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 TRIM5Q9C035 493 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 R3HCC1Q9Y3T6 440 aaKnown RBP22.31■■□□□ 1.16
SNX17-202ENST00000427123 CMA1P23946 247 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 AXDND1Q5T1B0 1012 aaPredicted RBP22.31■■□□□ 1.16
SNX17-202ENST00000427123 SARM1Q6SZW1 724 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 SDF4Q9BRK5 362 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 KCNF1Q9H3M0 494 aa22.31■■□□□ 1.16
SNX17-202ENST00000427123 TAF1LQ8IZX4 1826 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 NBPF5PQ86XG9 351 aaPredicted RBP22.3■■□□□ 1.16
SNX17-202ENST00000427123 CEP57L1Q8IYX8 460 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 JMYQ8N9B5 988 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 SDR42E1Q8WUS8 393 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 NLRP3Q96P20 1036 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 SPTLC3Q9NUV7 552 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 LY75O60449 1722 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 CCDC196A0A1B0GTZ2 297 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 PPP6R2O75170 966 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 ZPR1O75312 459 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 CDC25BP30305 580 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 NOLC1Q14978 699 aaKnown RBP eCLIP22.3■■□□□ 1.16
SNX17-202ENST00000427123 PTF1AQ7RTS3 328 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 FBXO33Q7Z6M2 555 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 TRIM22Q8IYM9 498 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
SNX17-202ENST00000427123 ZKSCAN3Q9BRR0 538 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 UBAC1Q9BSL1 405 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
SNX17-202ENST00000427123 NAT10Q9H0A0 1025 aaKnown RBP22.3■■□□□ 1.16
SNX17-202ENST00000427123 SRP68Q9UHB9 627 aaKnown RBP22.3■■□□□ 1.16
SNX17-202ENST00000427123 WTIPA6NIX2 430 aaPredicted RBP22.29■■□□□ 1.16
SNX17-202ENST00000427123 GNPATO15228 680 aa22.29■■□□□ 1.16
SNX17-202ENST00000427123 RPS8P62241 208 aaKnown RBP22.29■■□□□ 1.16
SNX17-202ENST00000427123 ESR2Q92731 530 aa22.29■■□□□ 1.16
SNX17-202ENST00000427123 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.29■■□□□ 1.16
SNX17-202ENST00000427123 ANKRD2Q9GZV1 360 aa22.29■■□□□ 1.16
SNX17-202ENST00000427123 DLEC1Q9Y238 1755 aa22.29■■□□□ 1.16
SNX17-202ENST00000427123 LAMB1P07942 1786 aa22.28■■□□□ 1.16
SNX17-202ENST00000427123 BAZ2AQ9UIF9 1905 aaKnown RBP22.28■■□□□ 1.16
SNX17-202ENST00000427123 MROH7-TTC4A0A0A0MT08 1334 aa22.28■■□□□ 1.16
SNX17-202ENST00000427123 MINDY4BA8MYZ0 360 aa22.28■■□□□ 1.16
SNX17-202ENST00000427123 PFKFB1P16118 471 aa22.28■■□□□ 1.16
SNX17-202ENST00000427123 ZNF654Q8IZM8 581 aa22.28■■□□□ 1.16
SNX17-202ENST00000427123 MAP3K14Q99558 947 aa22.28■■□□□ 1.16
SNX17-202ENST00000427123 PTPAQ15257 358 aa22.27■■□□□ 1.16
SNX17-202ENST00000427123 SMIM5Q71RC9 77 aa22.27■■□□□ 1.16
SNX17-202ENST00000427123 DRC7Q8IY82 874 aa22.27■■□□□ 1.16
SNX17-202ENST00000427123 KIAA1468Q9P260 1216 aa22.27■■□□□ 1.16
SNX17-202ENST00000427123 CCNL1Q9UK58 526 aaPredicted RBP22.27■■□□□ 1.16
SNX17-202ENST00000427123 BECN2A8MW95 431 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 WDHD1O75717 1129 aaPredicted RBP22.26■■□□□ 1.15
SNX17-202ENST00000427123 ZNF202O95125 648 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 PCP11498 1178 aaKnown RBP22.26■■□□□ 1.15
SNX17-202ENST00000427123 PTGS1P23219 599 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 TPTE2Q6XPS3 522 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 DHX40Q8IX18 779 aaKnown RBP22.26■■□□□ 1.15
SNX17-202ENST00000427123 KIAA1524Q8TCG1 905 aa22.26■■□□□ 1.15
SNX17-202ENST00000427123 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
SNX17-202ENST00000427123 DEXIO95424 95 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms