RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 SMIM5Q71RC9 77 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 USP17L1Q7RTZ2 530 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 LYSMD3Q7Z3D4 306 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PRICKLE2Q7Z3G6 844 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 LRP10Q7Z4F1 713 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 GAS2L3Q86XJ1 694 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 VWA5B2Q8N398 1253 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 ZGPATQ8N5A5 531 aaKnown RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PI4KAP1Q8N8J0 262 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PLPP7Q8NBV4 271 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 RHPN1Q8TCX5 695 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 ACSBG1Q96GR2 724 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 XAGE2Q96GT9 111 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 KAZALD1Q96I82 304 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 GBP4Q96PP9 640 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PANK2Q9BZ23 570 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 IL1RAPL2Q9NP60 686 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 TFIP11Q9UBB9 837 aaKnown RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 MAFBQ9Y5Q3 323 aaPredicted RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 UTYO14607 1347 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PLEKHG2Q9H7P9 1386 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PAPPAQ13219 1627 aa3.32□□□□□ -1.88
LINC00407-201ENST00000426509 PARP4Q9UKK3 1724 aaKnown RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 GOLGB1Q14789 3259 aaKnown RBP3.32□□□□□ -1.88
LINC00407-201ENST00000426509 LAMB4A4D0S4 1761 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 RAD50Q92878 1312 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 FOXN1O15353 648 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 SGSM2O43147 1006 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 SRGAP3O43295 1099 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 SURF6O75683 361 aaKnown RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 GNRH1P01148 92 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 PTMSP20962 102 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 RFX1P22670 979 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 LMOD1P29536 600 aaPredicted RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 HSPA4P34932 840 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 GPC1P35052 558 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 ANAPC15P60006 121 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 NUCB2P80303 420 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 CENPCQ03188 943 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 POU4F2Q12837 409 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 NCOA4Q13772 614 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 C1orf141Q5JVX7 400 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 RNFT1Q5M7Z0 435 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 KSR2Q6VAB6 950 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 CYP2U1Q7Z449 544 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 FAM43AQ8N2R8 423 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 ZNF592Q92610 1267 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 KIF1BPQ96EK5 621 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 SUCLG2Q96I99 432 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 TMX3Q96JJ7 454 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 LSG1Q9H089 658 aaKnown RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 GZF1Q9H116 711 aaPredicted RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 GRPEL1Q9HAV7 217 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 ARHGEF10LQ9HCE6 1279 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 CWC22Q9HCG8 908 aaKnown RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 RRAGDQ9NQL2 400 aaPredicted RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 DDX21Q9NR30 783 aaKnown RBP eCLIP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 RAB6BQ9NRW1 208 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 LMBRD1Q9NUN5 540 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 DBF4Q9UBU7 674 aaPredicted RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 SERPINA10Q9UK55 444 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 ISY1Q9ULR0 285 aaKnown RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 DOLKQ9UPQ8 538 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 MAP3K2Q9Y2U5 619 aa3.31□□□□□ -1.88
LINC00407-201ENST00000426509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.31□□□□□ -1.88
LINC00407-201ENST00000426509 CPDO75976 1380 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 COL15A1P39059 1388 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 RPAP1Q9BWH6 1393 aaPredicted RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 TTC41PQ6P2S7 1318 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 SPATA31C2B4DYI2 1134 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CYP27B1O15528 508 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 SASH1O94885 1247 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 BRD1O95696 1058 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 MAP4K4O95819 1239 aaPredicted RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 IGKV5-2P06315 115 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 HSP90AA1P07900 732 aaKnown RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 THBS1P07996 1170 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 PHKG2P15735 406 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 MCCP23508 829 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 MCM2P49736 904 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 MRE11P49959 708 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 NEK4P51957 841 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 SLC39A6Q13433 755 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 DBN1Q16643 649 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 KLHL40Q2TBA0 621 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CWF19L2Q2TBE0 894 aaKnown RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 SKOR2Q2VWA4 1001 aaPredicted RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 OXLD1Q5BKU9 147 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 EPHA10Q5JZY3 1008 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 COL23A1Q86Y22 540 aaPredicted RBP3.3□□□□□ -1.88
LINC00407-201ENST00000426509 ZSCAN1Q8NBB4 408 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 NFATC2IPQ8NCF5 419 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 LINS1Q8NG48 757 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 GPT2Q8TD30 523 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 KCNB2Q92953 911 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CNKSR1Q969H4 720 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 RILPL2Q969X0 211 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 ABHD8Q96I13 439 aa3.3□□□□□ -1.88
LINC00407-201ENST00000426509 CHAMP1Q96JM3 812 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms