RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 NTSR2O95665 410 aa15.46■□□□□ 0.07
USP42-203ENST00000426246 KARSQ15046 597 aaKnown RBP15.46■□□□□ 0.07
USP42-203ENST00000426246 CNNM3Q8NE01 707 aa15.46■□□□□ 0.07
USP42-203ENST00000426246 GOLGA8AA7E2F4 631 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
USP42-203ENST00000426246 CASP1P29466 404 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 NCOA7Q8NI08 942 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 NAPBQ9H115 298 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 RIPOR2Q9Y4F9 1068 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 UBASH3AP57075 661 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 RC3H1Q5TC82 1133 aaKnown RBP15.45■□□□□ 0.06
USP42-203ENST00000426246 VGLL2Q8N8G2 317 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 ARMT1Q9H993 441 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 LRP2BPQ9P2M1 347 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 AKAP11Q9UKA4 1901 aa15.45■□□□□ 0.06
USP42-203ENST00000426246 FOXN1O15353 648 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 OLFM4Q6UX06 510 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 MPHOSPH8Q99549 860 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 MAPK8IP1Q9UQF2 711 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 UBR3Q6ZT12 1888 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 DHX16O60231 1041 aaKnown RBP15.44■□□□□ 0.06
USP42-203ENST00000426246 PDE8AO60658 829 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 PFKFB2O60825 505 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 ITGA6P23229 1130 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 NCBP1Q09161 790 aaKnown RBP15.44■□□□□ 0.06
USP42-203ENST00000426246 TEX35Q5T0J7 233 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 AK7Q96M32 723 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 HMGB1P09429 215 aaKnown RBP15.44■□□□□ 0.06
USP42-203ENST00000426246 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
USP42-203ENST00000426246 VPS37DQ86XT2 251 aa15.44■□□□□ 0.06
USP42-203ENST00000426246 QTRT2Q9H974 415 aaKnown RBP15.44■□□□□ 0.06
USP42-203ENST00000426246 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
USP42-203ENST00000426246 MAGEB6Q8N7X4 407 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 HINFPQ9BQA5 517 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 DESI2Q9BSY9 194 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 PRKAB2O43741 272 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 PFKFB1P16118 471 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 CLEC4GQ6UXB4 293 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 CTNNA3Q9UI47 895 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 RGL2O15211 777 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 PHKA1P46020 1223 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
USP42-203ENST00000426246 DHX8Q14562 1220 aaKnown RBP15.43■□□□□ 0.06
USP42-203ENST00000426246 LONRF3Q496Y0 759 aa15.43■□□□□ 0.06
USP42-203ENST00000426246 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 RANBP6O60518 1105 aaKnown RBP15.42■□□□□ 0.06
USP42-203ENST00000426246 ERCC3P19447 782 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 PLIN2Q99541 437 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 RAI14Q9P0K7 980 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 TAF1P21675 1872 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 CARMIL3Q8ND23 1372 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 PARP10Q53GL7 1025 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 MYSM1Q5VVJ2 828 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 FDPSP14324 419 aaKnown RBP15.42■□□□□ 0.06
USP42-203ENST00000426246 CCDC34Q96HJ3 373 aa15.42■□□□□ 0.06
USP42-203ENST00000426246 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
USP42-203ENST00000426246 TERF1P54274 439 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
USP42-203ENST00000426246 ANO1Q5XXA6 986 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.06
USP42-203ENST00000426246 LZTFL1Q9NQ48 299 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 LRRC4BQ9NT99 713 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 WWC3Q9ULE0 1092 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 RFX7Q2KHR2 1363 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 RTL9Q8NET4 1388 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 BTBD18B2RXH4 712 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 ZBTB43O43298 467 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 MBD4O95243 580 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 KRT40Q6A162 431 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 LRRN4CLQ8ND94 238 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 TDRD7Q8NHU6 1098 aaKnown RBP15.41■□□□□ 0.06
USP42-203ENST00000426246 NIP7Q9Y221 180 aaKnown RBP eCLIP15.41■□□□□ 0.06
USP42-203ENST00000426246 ZNF532Q9HCE3 1301 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 SMTNL1A8MU46 457 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 KIAA1468Q9P260 1216 aa15.41■□□□□ 0.06
USP42-203ENST00000426246 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
USP42-203ENST00000426246 ERICH2A1L162 156 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 GNG11P61952 73 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 ZMYM1Q5SVZ6 1142 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 SMYD4Q8IYR2 804 aaPredicted RBP15.4■□□□□ 0.06
USP42-203ENST00000426246 NKX2-3Q8TAU0 364 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 FANCLQ9NW38 375 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 RAD21O60216 631 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 DPF2Q92785 391 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 FAM170AA1A519 330 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 SMIM22K7EJ46 135 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 FANCCQ00597 558 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 NR5A1Q13285 461 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 SDR42E1Q8WUS8 393 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 UBXN4Q92575 508 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 DHX58Q96C10 678 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 UIMC1Q96RL1 719 aa15.4■□□□□ 0.06
USP42-203ENST00000426246 RCOR1Q9UKL0 485 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms