RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
HDLBP-211ENST00000425989 ARFGEF1Q9Y6D6 1849 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 RCAN1P53805 252 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 HAND2P61296 217 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 C12orf60Q5U649 245 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-211ENST00000425989 SYNE3Q6ZMZ3 975 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 MB21D2Q8IYB1 491 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-211ENST00000425989 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-211ENST00000425989 MCM9Q9NXL9 1143 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 ZSWIM5Q9P217 1185 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
HDLBP-211ENST00000425989 PRC1O43663 620 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 POLR3DP05423 398 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 PDCP20941 246 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 DDIT3P35638 169 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 CRKP46108 304 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 RHBDL3P58872 404 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 DIXDC1Q155Q3 683 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 MTMR14Q8NCE2 650 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 SH3RF3Q8TEJ3 882 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
HDLBP-211ENST00000425989 JAG2Q9Y219 1238 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
HDLBP-211ENST00000425989 PFKFB2O60825 505 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 GRIK5Q16478 980 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 CIAPIN1Q6FI81 312 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 CPLX2Q6PUV4 134 aaKnown RBP11.3□□□□□ -0.6
HDLBP-211ENST00000425989 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-211ENST00000425989 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 TGFBRAP1Q8WUH2 860 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 GMLQ99445 158 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 TPCN1Q9ULQ1 816 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 SMC3Q9UQE7 1217 aa11.3□□□□□ -0.6
HDLBP-211ENST00000425989 BAZ2AQ9UIF9 1905 aaKnown RBP11.3□□□□□ -0.6
HDLBP-211ENST00000425989 MYH1P12882 1939 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 CCDC196A0A1B0GTZ2 297 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 IFIT3O14879 490 aaKnown RBP11.29□□□□□ -0.6
HDLBP-211ENST00000425989 ENTPD3O75355 529 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 CPA1P15085 419 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
HDLBP-211ENST00000425989 HMGN5P82970 282 aaKnown RBP11.29□□□□□ -0.6
HDLBP-211ENST00000425989 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 ME3Q16798 604 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 APOBEC3HQ6NTF7 200 aaKnown RBP11.29□□□□□ -0.6
HDLBP-211ENST00000425989 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-211ENST00000425989 DPF2Q92785 391 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 BRF1Q92994 677 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
HDLBP-211ENST00000425989 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 B4E1Z4 1266 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 KDM4AO75164 1064 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 CALM1P0DP23 149 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 CALM2P0DP24 149 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 CALM3P0DP25 149 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 PTMSP20962 102 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
HDLBP-211ENST00000425989 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■■□□□ 14.5
HDLBP-211ENST00000425989 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 CDC42EP5Q6NZY7 148 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 DGKHQ86XP1 1220 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 UBAC1Q9BSL1 405 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 KCNQ5Q9NR82 932 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDLBP-211ENST00000425989 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
HDLBP-211ENST00000425989 CDK5RAP2Q96SN8 1893 aa11.27□□□□□ -0.6
HDLBP-211ENST00000425989 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
HDLBP-211ENST00000425989 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
HDLBP-211ENST00000425989 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-211ENST00000425989 FZD9O00144 591 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms