RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 KIF1BPQ96EK5 621 aa22.45■■□□□ 1.18
SMARCAL1-205ENST00000425815 ABHD8Q96I13 439 aa22.45■■□□□ 1.18
SMARCAL1-205ENST00000425815 MCOLN1Q9GZU1 580 aa22.45■■□□□ 1.18
SMARCAL1-205ENST00000425815 ANTXR1Q9H6X2 564 aa22.45■■□□□ 1.18
SMARCAL1-205ENST00000425815 PHF20L1A8MW92 1017 aa22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 GPR25O00155 361 aa22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 RAB11FIP3O75154 756 aa22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 NPM3O75607 178 aaKnown RBP22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 PICALMQ13492 652 aa22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 ZNF296Q8WUU4 475 aaPredicted RBP22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 OTUD5Q96G74 571 aa22.44■■□□□ 1.18
SMARCAL1-205ENST00000425815 ALDH1A1P00352 501 aa22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 DGKZQ13574 1117 aa22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 NOM1Q5C9Z4 860 aaKnown RBP22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 NAA16Q6N069 864 aaPredicted RBP22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 ERO1BQ86YB8 467 aa22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 BRI3BPQ8WY22 251 aa22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
SMARCAL1-205ENST00000425815 CASP8AP2Q9UKL3 1982 aa22.42■■□□□ 1.18
SMARCAL1-205ENST00000425815 MYH2Q9UKX2 1941 aa22.42■■□□□ 1.18
SMARCAL1-205ENST00000425815 MAP4K4O95819 1239 aaPredicted RBP22.42■■□□□ 1.18
SMARCAL1-205ENST00000425815 PPP4CP60510 307 aa22.42■■□□□ 1.18
SMARCAL1-205ENST00000425815 CLASRPQ8N2M8 674 aaKnown RBP22.42■■□□□ 1.18
SMARCAL1-205ENST00000425815 SH3RF3Q8TEJ3 882 aaPredicted RBP22.42■■□□□ 1.18
SMARCAL1-205ENST00000425815 OTOFQ9HC10 1997 aa22.41■■□□□ 1.18
SMARCAL1-205ENST00000425815 IRF6O14896 467 aa22.41■■□□□ 1.18
SMARCAL1-205ENST00000425815 GTF2A2P52657 109 aa22.41■■□□□ 1.18
SMARCAL1-205ENST00000425815 AATFQ9NY61 560 aaKnown RBP eCLIP22.41■■□□□ 1.18
SMARCAL1-205ENST00000425815 AKAP11Q9UKA4 1901 aa22.41■■□□□ 1.18
SMARCAL1-205ENST00000425815 IGSF3O75054 1194 aa22.4■■□□□ 1.18
SMARCAL1-205ENST00000425815 NOL9Q5SY16 702 aaKnown RBP22.4■■□□□ 1.18
SMARCAL1-205ENST00000425815 ZSCAN29Q8IWY8 852 aaPredicted RBP22.4■■□□□ 1.18
SMARCAL1-205ENST00000425815 PPATQ06203 517 aa22.39■■□□□ 1.17
SMARCAL1-205ENST00000425815 PPIL2Q13356 520 aa22.39■■□□□ 1.17
SMARCAL1-205ENST00000425815 TEX11Q8IYF3 940 aa22.39■■□□□ 1.17
SMARCAL1-205ENST00000425815 OSBPL5Q9H0X9 879 aaPredicted RBP22.39■■□□□ 1.17
SMARCAL1-205ENST00000425815 CCL15-CCL14A0A0B4J2E2 113 aa22.38■■□□□ 1.17
SMARCAL1-205ENST00000425815 IFIT2P09913 472 aaKnown RBP22.38■■□□□ 1.17
SMARCAL1-205ENST00000425815 RRP1P56182 461 aaKnown RBP22.38■■□□□ 1.17
SMARCAL1-205ENST00000425815 CRHR2Q13324 411 aa22.38■■□□□ 1.17
SMARCAL1-205ENST00000425815 CCL15Q16663 113 aa22.38■■□□□ 1.17
SMARCAL1-205ENST00000425815 FAM43AQ8N2R8 423 aa22.38■■□□□ 1.17
SMARCAL1-205ENST00000425815 TBC1D12O60347 775 aa22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 IDH1O75874 414 aaKnown RBP22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 BAG3O95817 575 aa22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 CYP7A1P22680 504 aa22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 DYNLL1P63167 89 aaKnown RBP22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 OTUD7BQ6GQQ9 843 aa22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 CTU1Q7Z7A3 348 aaKnown RBP22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 PCDHB15Q9Y5E8 787 aa22.37■■□□□ 1.17
SMARCAL1-205ENST00000425815 SMARCA5O60264 1052 aaPredicted RBP22.36■■□□□ 1.17
SMARCAL1-205ENST00000425815 FKTNO75072 461 aa22.36■■□□□ 1.17
SMARCAL1-205ENST00000425815 TGFBRAP1Q8WUH2 860 aa22.36■■□□□ 1.17
SMARCAL1-205ENST00000425815 BCL11AQ9H165 835 aa22.36■■□□□ 1.17
SMARCAL1-205ENST00000425815 DCTPP1Q9H773 170 aa22.36■■□□□ 1.17
SMARCAL1-205ENST00000425815 KCNH4Q9UQ05 1017 aa22.36■■□□□ 1.17
SMARCAL1-205ENST00000425815 FAM196BA6NMK8 535 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 BTBD19C9JJ37 291 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 CETPP11597 493 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 SNAPC2Q13487 334 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 MOGSQ13724 837 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 RRP1BQ14684 758 aaKnown RBP22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 SCYL3Q8IZE3 742 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 MAGEB6Q8N7X4 407 aa22.35■■□□□ 1.17
SMARCAL1-205ENST00000425815 PLCG2P16885 1265 aa22.34■■□□□ 1.17
SMARCAL1-205ENST00000425815 PTPRAP18433 802 aa22.34■■□□□ 1.17
SMARCAL1-205ENST00000425815 MAPKAPK5Q8IW41 473 aa22.34■■□□□ 1.17
SMARCAL1-205ENST00000425815 EDC3Q96F86 508 aaKnown RBP22.34■■□□□ 1.17
SMARCAL1-205ENST00000425815 NOL10Q9BSC4 688 aaKnown RBP22.34■■□□□ 1.17
SMARCAL1-205ENST00000425815 LAMB1P07942 1786 aa22.34■■□□□ 1.17
SMARCAL1-205ENST00000425815 CTNND1O60716 968 aaKnown RBP22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 CAP1Q01518 475 aa22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 MAP3K12Q12852 859 aa22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 MIGA1Q8NAN2 632 aa22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 LRRCC1Q9C099 1032 aa22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 BOLA2Q9H3K6 86 aa22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.33■■□□□ 1.17
SMARCAL1-205ENST00000425815 COL2A1P02458 1487 aaPredicted RBP22.33■■□□□ 1.16
SMARCAL1-205ENST00000425815 FLT1P17948 1338 aa22.32■■□□□ 1.16
SMARCAL1-205ENST00000425815 ATP5JP18859 108 aa22.32■■□□□ 1.16
SMARCAL1-205ENST00000425815 AFG3L2Q9Y4W6 797 aa22.32■■□□□ 1.16
SMARCAL1-205ENST00000425815 ZHX2Q9Y6X8 837 aa22.32■■□□□ 1.16
SMARCAL1-205ENST00000425815 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 GOLIM4O00461 696 aa22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 CXCL11O14625 94 aa22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 TTF1Q15361 905 aaPredicted RBP22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 CRBNQ96SW2 442 aa22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 DNAJC2Q99543 621 aaKnown RBP22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 PI4KBQ9UBF8 816 aa22.31■■□□□ 1.16
SMARCAL1-205ENST00000425815 TCRBV5S4A2TA0A5A2 114 aa22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 TAF1CQ15572 869 aaPredicted RBP22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 TMED8Q6PL24 325 aaPredicted RBP22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 RIOK1Q9BRS2 568 aaKnown RBP22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 DHX36Q9H2U1 1008 aaKnown RBP22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 ZFYVE28Q9HCC9 887 aa22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 PICK1Q9NRD5 415 aa22.3■■□□□ 1.16
SMARCAL1-205ENST00000425815 PALD1Q9ULE6 856 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms