RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZBTB9Q96C00 473 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 BAG1Q99933 345 aaPredicted RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 NAPBQ9H115 298 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 ZSWIM5Q9P217 1185 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 SERTAD1Q9UHV2 236 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 NFE2L3Q9Y4A8 694 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 RIPOR2Q9Y4F9 1068 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 ANKRD18BA2A2Z9 1011 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 CASQ1P31415 396 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 HLFQ16534 295 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 TEX35Q5T0J7 233 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 DIS3L2Q8IYB7 885 aaKnown RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 ZBTB38Q8NAP3 1195 aaPredicted RBP8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 DESI2Q9BSY9 194 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 CPDO75976 1380 aa8.64□□□□□ -1.03
SMARCC1-202ENST00000425518 UBN2Q6ZU65 1347 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 FANCGO15287 622 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 TUBB4AP04350 444 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 PNMA6AP0CW24 399 aaPredicted RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 KCNJ6P48051 423 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 KARSQ15046 597 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 KLHL10Q6JEL2 608 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 CPLX3Q8WVH0 158 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 TMEM87BQ96K49 555 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 ZSWIM4Q9H7M6 989 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 ARMT1Q9H993 441 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 FAM217BQ9NTX9 383 aaPredicted RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 TRMT112Q9UI30 125 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 HOOK1Q9UJC3 728 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 ARHGAP6O43182 974 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 PRR29P0C7W0 189 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.035e-7■■□□□ 11.7
SMARCC1-202ENST00000425518 TTF1Q15361 905 aaPredicted RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 NTRK3Q16288 839 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 NOSTRINQ8IVI9 506 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 MAGEB6Q8N7X4 407 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 TTLL11Q8NHH1 800 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 LY9Q9HBG7 655 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 INTS13Q9NVM9 706 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 MAN1B1Q9UKM7 699 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 ASAP1Q9ULH1 1129 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 PHLPP2Q6ZVD8 1323 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 MBD4O95243 580 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 CSF1RP07333 972 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 EVA1CP58658 441 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 NR5A1Q13285 461 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 POSTNQ15063 836 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 SMARCE1Q969G3 411 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 WDR24Q96S15 920 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 SAMSN1Q9NSI8 373 aaKnown RBP8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
SMARCC1-202ENST00000425518 RGPD5Q99666 1765 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 VWA3AA6NCI4 1184 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 IRS4O14654 1257 aaPredicted RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 PRKAB2O43741 272 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 STX17P56962 302 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 UBE3CQ15386 1083 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 TOGARAM2Q6ZUX3 1019 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 USP49Q70CQ1 688 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 TRIM22Q8IYM9 498 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 SIPA1L3O60292 1781 aaPredicted RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 WDR19Q8NEZ3 1342 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 PLA2G4AP47712 749 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 FAM53CQ9NYF3 392 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 PHRF1Q9P1Y6 1649 aaKnown RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 TADA3O75528 432 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 PDE8BO95263 885 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 IL2RBP14784 551 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 AFMP43652 599 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 TDO2P48775 406 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 TOB1P50616 345 aaPredicted RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 SPECC1LQ69YQ0 1117 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 MFSD6Q6ZSS7 791 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 CREBRFQ8IUR6 639 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 SRRTQ9BXP5 876 aaKnown RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 CABP5Q9NP86 173 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 PCDHB6Q9Y5E3 794 aa8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 AFDNP55196 1824 aaKnown RBP8.62□□□□□ -1.03
SMARCC1-202ENST00000425518 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 STARD3NLO95772 234 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 RTN1Q16799 776 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 IRX2Q9BZI1 471 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 ZCCHC17Q9NP64 241 aaKnown RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 LAMA4Q16363 1823 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 ABCC6O95255 1503 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 hCG_1642624A0A1W2PR95 340 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 MTF1Q14872 753 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 NLRP10Q86W26 655 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 MIGA1Q8NAN2 632 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms