RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
CALD1-206ENST00000424922 NFKBIEO00221 500 aa17.7■□□□□ 0.42
CALD1-206ENST00000424922 BRD1O95696 1058 aa17.7■□□□□ 0.42
CALD1-206ENST00000424922 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
CALD1-206ENST00000424922 DHX32Q7L7V1 743 aaKnown RBP17.7■□□□□ 0.42
CALD1-206ENST00000424922 USP5P45974 858 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 NIM1KQ8IY84 436 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 NCOA7Q8NI08 942 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 LRRC2Q9BYS8 371 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 LMBRD1Q9NUN5 540 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 SRCAPQ6ZRS2 3230 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 RAD17O75943 681 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 PPARAQ07869 468 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 TRDNQ13061 729 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 MCTP1Q6DN14 999 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 RALYLQ86SE5 291 aaKnown RBP17.69■□□□□ 0.42
CALD1-206ENST00000424922 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
CALD1-206ENST00000424922 CYP2D7A0A087X1C5 515 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 USP17L21D6R901 530 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
CALD1-206ENST00000424922 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
CALD1-206ENST00000424922 Q6ZUG5 572 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 TEKT1Q969V4 418 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 ALDH8A1Q9H2A2 487 aaPredicted RBP17.68■□□□□ 0.42
CALD1-206ENST00000424922 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
CALD1-206ENST00000424922 SMIM22K7EJ46 135 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 PLCG2P16885 1265 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 RHBDL3P58872 404 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 HHIPL2Q6UWX4 724 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 TEX11Q8IYF3 940 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 ZMYND15Q9H091 742 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
CALD1-206ENST00000424922 NEDD4P46934 1319 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 PSMD14O00487 310 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 FGD1P98174 961 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 ANKRD1Q15327 319 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
CALD1-206ENST00000424922 GRPEL1Q9HAV7 217 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 MCM9Q9NXL9 1143 aa17.67■□□□□ 0.42
CALD1-206ENST00000424922 MCM5P33992 734 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 CRKP46108 304 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 RASSF7Q02833 373 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 MAPKAPK5Q8IW41 473 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
CALD1-206ENST00000424922 ANAPC4Q9UJX5 808 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 B4E1Z4 1266 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 LARGE1O95461 756 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 EVX2Q03828 476 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
CALD1-206ENST00000424922 VIL1P09327 827 aaKnown RBP17.65■□□□□ 0.42
CALD1-206ENST00000424922 USP17L8P0C7I0 530 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 CYP2D6P10635 497 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.42
CALD1-206ENST00000424922 SLC4A8Q2Y0W8 1093 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 RSBN1LQ6PCB5 846 aaPredicted RBP17.65■□□□□ 0.42
CALD1-206ENST00000424922 TOMM22Q9NS69 142 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
CALD1-206ENST00000424922 LTBP3Q9NS15 1303 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 PRC1O43663 620 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 ANTXR2P58335 489 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 DDX60LQ5H9U9 1706 aaKnown RBP17.65■□□□□ 0.42
CALD1-206ENST00000424922 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
CALD1-206ENST00000424922 BRF1Q92994 677 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 MRIQ9BWK5 157 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
CALD1-206ENST00000424922 CNNM2Q9H8M5 875 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 PCDHAC2Q9Y5I4 1007 aa17.65■□□□□ 0.42
CALD1-206ENST00000424922 HDLBPQ00341 1268 aaKnown RBP17.64■□□□□ 0.41
CALD1-206ENST00000424922 ME3Q16798 604 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 SBK1Q52WX2 424 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
CALD1-206ENST00000424922 CYB5R4Q7L1T6 521 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.41
CALD1-206ENST00000424922 ZDHHC15Q96MV8 337 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 SYT17Q9BSW7 474 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 KRT23Q9C075 422 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 MYO3BQ8WXR4 1341 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 SBF1O95248 1867 aa17.64■□□□□ 0.41
CALD1-206ENST00000424922 CXCL9Q07325 125 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 SAP30BPQ9UHR5 308 aaKnown RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 SERPINA10Q9UK55 444 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 DICER1Q9UPY3 1922 aaKnown RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 FLT1P17948 1338 aa17.63■□□□□ 0.41
CALD1-206ENST00000424922 WDR33Q9C0J8 1336 aaKnown RBP17.63■□□□□ 0.41
CALD1-206ENST00000424922 KDM4AO75164 1064 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms