RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RIPK4P57078 832 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 LMOD3Q0VAK6 560 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 CHAF1AQ13111 956 aaPredicted RBP8.11□□□□□ -1.11
SDCBP-203ENST00000424270 VPS37DQ86XT2 251 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 TRIB2Q92519 343 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 TEKT1Q969V4 418 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 TIFAQ96CG3 184 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 BABAM1Q9NWV8 329 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 TRIM75PA6NK02 468 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 HAX1O00165 279 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 PER1O15534 1290 aaPredicted RBP8.1□□□□□ -1.11
SDCBP-203ENST00000424270 NEXNQ0ZGT2 675 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 TCP10Q12799 353 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 MOGSQ13724 837 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 FAM110CQ1W6H9 321 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 TAF7LQ5H9L4 462 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 PRDM12Q9H4Q4 367 aa8.1□□□□□ -1.11
SDCBP-203ENST00000424270 ARAP2Q8WZ64 1704 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 A0A0G2JLL6 359 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 ANKRD18BA2A2Z9 1011 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 PPP2R1AP30153 589 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 CCND3P30281 292 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 CSPP1Q1MSJ5 1256 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 AKNAD1Q5T1N1 836 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 UBE3BQ7Z3V4 1068 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 PRRT2Q7Z6L0 340 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 FAM83AQ86UY5 434 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 NUDT12Q9BQG2 462 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 PHAXQ9H814 394 aaKnown RBP8.09□□□□□ -1.11
SDCBP-203ENST00000424270 SLC45A1Q9Y2W3 748 aa8.09□□□□□ -1.11
SDCBP-203ENST00000424270 PRUNE2Q8WUY3 3088 aa8.08□□□□□ -1.12
SDCBP-203ENST00000424270 DLG5Q8TDM6 1919 aa8.08□□□□□ -1.12
SDCBP-203ENST00000424270 GCLCP48506 637 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-203ENST00000424270 CACNB2Q08289 660 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-203ENST00000424270 PABPC4Q13310 644 aaKnown RBP eCLIP8.08□□□□□ -1.12
SDCBP-203ENST00000424270 SP7Q8TDD2 431 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-203ENST00000424270 SOCS4Q8WXH5 440 aa8.08□□□□□ -1.12
SDCBP-203ENST00000424270 METTL22Q9BUU2 404 aaPredicted RBP8.08□□□□□ -1.12
SDCBP-203ENST00000424270 TIMELESSQ9UNS1 1208 aa8.08□□□□□ -1.12
SDCBP-203ENST00000424270 AGTPBP1Q9UPW5 1226 aa8.08□□□□□ -1.12
SDCBP-203ENST00000424270 MAP3K2Q9Y2U5 619 aa8.08□□□□□ -1.12
SDCBP-203ENST00000424270 LRRFIP2Q9Y608 721 aaKnown RBP8.08□□□□□ -1.12
SDCBP-203ENST00000424270 KBTBD13C9JR72 458 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 SMIM22K7EJ46 135 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 HOXB7P09629 217 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 HIBADHP31937 336 aaKnown RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 ZEB1P37275 1124 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 GYG1P46976 350 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 KCNQ1P51787 676 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 TFF2Q03403 129 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 NOL9Q5SY16 702 aaKnown RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 DUSP27Q5VZP5 1158 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 C15orf52Q6ZUT6 534 aaKnown RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 ZSCAN29Q8IWY8 852 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 SCYL3Q8IZE3 742 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 CNNM1Q9NRU3 951 aa8.07□□□□□ -1.12
SDCBP-203ENST00000424270 CXXC1Q9P0U4 656 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 IQSEC3Q9UPP2 1182 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-203ENST00000424270 MAST3O60307 1309 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 DNM1LO00429 736 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 GPR37L1O60883 481 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 RAG1P15918 1043 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 PTPRAP18433 802 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 RGS2P41220 211 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 FPGSQ05932 587 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 IFIT5Q13325 482 aaKnown RBP8.06□□□□□ -1.12
SDCBP-203ENST00000424270 TRIM60Q495X7 471 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 TREML2Q5T2D2 321 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 MAP3K21Q5TCX8 1036 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 MFSD14CQ5VZR4 134 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 LHX8Q68G74 356 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 TBC1D22AQ8WUA7 517 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 FAM151AQ8WW52 585 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 PLEKHF1Q96S99 279 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 GJD2Q9UKL4 321 aa8.06□□□□□ -1.12
SDCBP-203ENST00000424270 RPAP1Q9BWH6 1393 aaPredicted RBP8.06□□□□□ -1.12
SDCBP-203ENST00000424270 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 APBB1O00213 710 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 ELL2O00472 640 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-203ENST00000424270 MSCO60682 206 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 BMP1P13497 986 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 IRX3P78415 501 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-203ENST00000424270 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
SDCBP-203ENST00000424270 CCL14Q16627 93 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 CWF19L2Q2TBE0 894 aaKnown RBP8.05□□□□□ -1.12
SDCBP-203ENST00000424270 GJC2Q5T442 439 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-203ENST00000424270 WDR78Q5VTH9 848 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 FKBP1CQ5VVH2 108 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 ARRDC4Q8NCT1 418 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 ZDHHC15Q96MV8 337 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 DDX20Q9UHI6 824 aaKnown RBP8.05□□□□□ -1.12
SDCBP-203ENST00000424270 MSRAQ9UJ68 235 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 ZNF112Q9UJU3 913 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 AFG3L2Q9Y4W6 797 aa8.05□□□□□ -1.12
SDCBP-203ENST00000424270 MYBBP1AQ9BQG0 1328 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms