RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 GPN3Q9UHW5 284 aaPredicted RBP4.31□□□□□ -1.72
PMS1-209ENST00000424059 DCTN4Q9UJW0 460 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 GNEQ9Y223 722 aaKnown RBP4.31□□□□□ -1.72
PMS1-209ENST00000424059 DYNC1LI2O43237 492 aaPredicted RBP4.31□□□□□ -1.72
PMS1-209ENST00000424059 FAM87AP0C7U9 286 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 FUT4P22083 530 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 ARNTP27540 789 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 ERVK-24P63145 666 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 COL19A1Q14993 1142 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 IFI16Q16666 785 aaKnown RBP4.31□□□□□ -1.72
PMS1-209ENST00000424059 OGFOD2Q6N063 350 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 PDZD3Q86UT5 571 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 LSRQ86X29 649 aaPredicted RBP4.31□□□□□ -1.72
PMS1-209ENST00000424059 SULF2Q8IWU5 870 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 PKNOX2Q96KN3 472 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 SRCIN1Q9C0H9 1055 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 DISC1Q9NRI5 854 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 SAMM50Q9Y512 469 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 TMEM265A0A087WTH1 108 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 NME2P22392 152 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 FCGRTP55899 365 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 FZD5Q13467 585 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 PLCL1Q15111 1095 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 ATG4DQ86TL0 474 aaPredicted RBP4.3□□□□□ -1.72
PMS1-209ENST00000424059 WFDC3Q8IUB2 231 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 FBF1Q8TES7 1133 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 PPM1HQ9ULR3 514 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 SNX11Q9Y5W9 270 aa4.3□□□□□ -1.72
PMS1-209ENST00000424059 GIPC1O14908 333 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 RNF214Q8ND24 703 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 EPS8L3Q8TE67 593 aaKnown RBP4.29□□□□□ -1.72
PMS1-209ENST00000424059 CEP44Q9C0F1 390 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 CACNA2D2Q9NY47 1150 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 RNGTTO60942 597 aaKnown RBP4.29□□□□□ -1.72
PMS1-209ENST00000424059 PAPLNO95428 1278 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 CEACAM5P06731 702 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 DSC3Q14574 896 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 TTLL4Q14679 1199 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 ENOX2Q16206 610 aaKnown RBP4.29□□□□□ -1.72
PMS1-209ENST00000424059 ZNF792Q3KQV3 632 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 ZC3H12AQ5D1E8 599 aaKnown RBP4.29□□□□□ -1.72
PMS1-209ENST00000424059 ARHGAP27Q6ZUM4 889 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 KCNB2Q92953 911 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 HRASLS5Q96KN8 279 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 BCO2Q9BYV7 579 aa4.29□□□□□ -1.72
PMS1-209ENST00000424059 IGF2BP3O00425 579 aaKnown RBP eCLIP4.28□□□□□ -1.72
PMS1-209ENST00000424059 GSTT1P30711 240 aa4.28□□□□□ -1.72
PMS1-209ENST00000424059 CDK5R2Q13319 367 aa4.28□□□□□ -1.72
PMS1-209ENST00000424059 TAF7LQ5H9L4 462 aa4.28□□□□□ -1.72
PMS1-209ENST00000424059 TMC7Q7Z402 723 aa4.28□□□□□ -1.72
PMS1-209ENST00000424059 RETREG2Q8NC44 543 aa4.28□□□□□ -1.72
PMS1-209ENST00000424059 WDR89Q96FK6 387 aaPredicted RBP4.28□□□□□ -1.72
PMS1-209ENST00000424059 TNKS2Q9H2K2 1166 aa4.28□□□□□ -1.72
PMS1-209ENST00000424059 TREHO43280 583 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 TRIM37O94972 964 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 NEFMP07197 916 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 ZNF157P51786 506 aaPredicted RBP4.28□□□□□ -1.73
PMS1-209ENST00000424059 OXCT1P55809 520 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 PLCB3Q01970 1234 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 ZNF252P-AS1Q0IIN9 211 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 LRRC14Q15048 493 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 ANGEL2Q5VTE6 544 aaKnown RBP4.28□□□□□ -1.73
PMS1-209ENST00000424059 ZNF574Q6ZN55 896 aaPredicted RBP4.28□□□□□ -1.73
PMS1-209ENST00000424059 KCT2Q8NC54 265 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 ISL2Q96A47 359 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 DUSP23Q9BVJ7 150 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 GTF2IRD1Q9UHL9 959 aa4.28□□□□□ -1.73
PMS1-209ENST00000424059 BRD1O95696 1058 aa4.27□□□□□ -1.73
PMS1-209ENST00000424059 JAG1P78504 1218 aa4.27□□□□□ -1.73
PMS1-209ENST00000424059 SPRED2Q7Z698 418 aa4.27□□□□□ -1.73
PMS1-209ENST00000424059 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.27□□□□□ -1.73
PMS1-209ENST00000424059 PLD6Q8N2A8 252 aaKnown RBP4.27□□□□□ -1.73
PMS1-209ENST00000424059 ZC3H12CQ9C0D7 883 aaKnown RBP4.27□□□□□ -1.73
PMS1-209ENST00000424059 RC3H2Q9HBD1 1191 aaKnown RBP4.27□□□□□ -1.73
PMS1-209ENST00000424059 LGR6Q9HBX8 967 aa4.27□□□□□ -1.73
PMS1-209ENST00000424059 PNMA6FA0A0J9YX94 578 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 FANCGO15287 622 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 CENPBP07199 599 aaPredicted RBP4.26□□□□□ -1.73
PMS1-209ENST00000424059 C8AP07357 584 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 DHX37Q8IY37 1157 aaKnown RBP4.26□□□□□ -1.73
PMS1-209ENST00000424059 TOP6BLQ8N6T0 577 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 PI4K2BQ8TCG2 481 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 TMEM40Q8WWA1 233 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 NECAB3Q96P71 396 aaPredicted RBP4.26□□□□□ -1.73
PMS1-209ENST00000424059 SSU72Q9NP77 194 aaKnown RBP4.26□□□□□ -1.73
PMS1-209ENST00000424059 CD8BP10966 210 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 HCLS1P14317 486 aaPredicted RBP4.26□□□□□ -1.73
PMS1-209ENST00000424059 ALG1LQ6GMV1 187 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 SLC23A3Q6PIS1 610 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 FAM181AQ8N9Y4 354 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 FLAD1Q8NFF5 587 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 GPBAR1Q8TDU6 330 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 FRMD6Q96NE9 622 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 BIN2Q9UBW5 565 aaPredicted RBP4.26□□□□□ -1.73
PMS1-209ENST00000424059 AKAP2Q9Y2D5 859 aa4.26□□□□□ -1.73
PMS1-209ENST00000424059 LEFTY1O75610 366 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 CLCN7P51798 805 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 BNIP3Q12983 259 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 AOC3Q16853 763 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms