RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 TCP10Q12799 353 aa20.46■□□□□ 0.87
FOXN4-203ENST00000423960 PICALMQ13492 652 aa20.46■□□□□ 0.87
FOXN4-203ENST00000423960 PRAMEF18Q5VWM3 479 aa20.46■□□□□ 0.87
FOXN4-203ENST00000423960 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
FOXN4-203ENST00000423960 ARMT1Q9H993 441 aa20.46■□□□□ 0.87
FOXN4-203ENST00000423960 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
FOXN4-203ENST00000423960 HIP1O00291 1037 aa20.45■□□□□ 0.86
FOXN4-203ENST00000423960 ENTPD3O75355 529 aa20.45■□□□□ 0.86
FOXN4-203ENST00000423960 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
FOXN4-203ENST00000423960 BMP2KLQ5H9B9 411 aa20.45■□□□□ 0.86
FOXN4-203ENST00000423960 LCORLQ8N3X6 602 aa20.45■□□□□ 0.86
FOXN4-203ENST00000423960 CDCA5Q96FF9 252 aa20.45■□□□□ 0.86
FOXN4-203ENST00000423960 CRNKL1Q9BZJ0 848 aaKnown RBP20.45■□□□□ 0.86
FOXN4-203ENST00000423960 TMEM39BQ9GZU3 492 aa20.45■□□□□ 0.86
FOXN4-203ENST00000423960 DDX4Q9NQI0 724 aaKnown RBP20.45■□□□□ 0.86
FOXN4-203ENST00000423960 FOXN1O15353 648 aa20.44■□□□□ 0.86
FOXN4-203ENST00000423960 ECE1P42892 770 aa20.44■□□□□ 0.86
FOXN4-203ENST00000423960 USP5P45974 858 aa20.44■□□□□ 0.86
FOXN4-203ENST00000423960 ZFPM1Q8IX07 1006 aa20.44■□□□□ 0.86
FOXN4-203ENST00000423960 STRBPQ96SI9 672 aaKnown RBP20.44■□□□□ 0.86
FOXN4-203ENST00000423960 SEC62Q99442 399 aaKnown RBP20.44■□□□□ 0.86
FOXN4-203ENST00000423960 HELLSQ9NRZ9 838 aa20.44■□□□□ 0.86
FOXN4-203ENST00000423960 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
FOXN4-203ENST00000423960 M0R2C6 588 aa20.43■□□□□ 0.86
FOXN4-203ENST00000423960 AOC2O75106 756 aa20.43■□□□□ 0.86
FOXN4-203ENST00000423960 NMIQ13287 307 aaPredicted RBP20.43■□□□□ 0.86
FOXN4-203ENST00000423960 SUPT20HL1Q3ZLR7 823 aa20.43■□□□□ 0.86
FOXN4-203ENST00000423960 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
FOXN4-203ENST00000423960 MAPKAPK5Q8IW41 473 aa20.43■□□□□ 0.86
FOXN4-203ENST00000423960 FAM227BQ96M60 508 aa20.43■□□□□ 0.86
FOXN4-203ENST00000423960 GPAA1O43292 621 aa20.42■□□□□ 0.86
FOXN4-203ENST00000423960 HUNKP57058 714 aa20.42■□□□□ 0.86
FOXN4-203ENST00000423960 NBPF12Q5TAG4 269 aaPredicted RBP20.42■□□□□ 0.86
FOXN4-203ENST00000423960 IFFO2Q5TF58 517 aa20.42■□□□□ 0.86
FOXN4-203ENST00000423960 ZSCAN29Q8IWY8 852 aaPredicted RBP20.42■□□□□ 0.86
FOXN4-203ENST00000423960 TEPSINQ96N21 525 aa20.42■□□□□ 0.86
FOXN4-203ENST00000423960 OSBPL5Q9H0X9 879 aaPredicted RBP20.42■□□□□ 0.86
FOXN4-203ENST00000423960 GBA2Q9HCG7 927 aaPredicted RBP20.42■□□□□ 0.86
FOXN4-203ENST00000423960 WBP1LQ9NX94 342 aa20.42■□□□□ 0.86
FOXN4-203ENST00000423960 POLR2AP24928 1970 aaKnown RBP20.42■□□□□ 0.86
FOXN4-203ENST00000423960 ECM29Q5VYK3 1845 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 A0A0D9SFI3 127 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 PRKAB2O43741 272 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 GNAT2P19087 354 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 NF2P35240 595 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
FOXN4-203ENST00000423960 SLC4A4Q9Y6R1 1079 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 FLT1P17948 1338 aa20.41■□□□□ 0.86
FOXN4-203ENST00000423960 CHMLP26374 656 aa20.4■□□□□ 0.86
FOXN4-203ENST00000423960 C2orf69Q8N8R5 385 aa20.4■□□□□ 0.86
FOXN4-203ENST00000423960 SDR42E1Q8WUS8 393 aa20.4■□□□□ 0.86
FOXN4-203ENST00000423960 TRPM7Q96QT4 1865 aa20.4■□□□□ 0.86
FOXN4-203ENST00000423960 ATP8A2Q9NTI2 1148 aa20.4■□□□□ 0.86
FOXN4-203ENST00000423960 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.85
FOXN4-203ENST00000423960 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.85
FOXN4-203ENST00000423960 CCDC129Q6ZRS4 1044 aa20.39■□□□□ 0.85
FOXN4-203ENST00000423960 SH3BP5LQ7L8J4 393 aa20.39■□□□□ 0.85
FOXN4-203ENST00000423960 CDAN1Q8IWY9 1227 aa20.39■□□□□ 0.85
FOXN4-203ENST00000423960 HOOK2Q96ED9 719 aa20.39■□□□□ 0.85
FOXN4-203ENST00000423960 HHIPL1Q96JK4 782 aa20.39■□□□□ 0.85
FOXN4-203ENST00000423960 MYH7P12883 1935 aa20.39■□□□□ 0.85
FOXN4-203ENST00000423960 DDTLA6NHG4 134 aaPredicted RBP20.38■□□□□ 0.85
FOXN4-203ENST00000423960 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
FOXN4-203ENST00000423960 RUFY2Q8WXA3 655 aa20.38■□□□□ 0.85
FOXN4-203ENST00000423960 DDRGK1Q96HY6 314 aa20.38■□□□□ 0.85
FOXN4-203ENST00000423960 DHX36Q9H2U1 1008 aaKnown RBP20.38■□□□□ 0.85
FOXN4-203ENST00000423960 DCP1AQ9NPI6 582 aaPredicted RBP20.38■□□□□ 0.85
FOXN4-203ENST00000423960 SAP30BPQ9UHR5 308 aaKnown RBP20.38■□□□□ 0.85
FOXN4-203ENST00000423960 RPAP1Q9BWH6 1393 aaPredicted RBP20.37■□□□□ 0.85
FOXN4-203ENST00000423960 GSG1L2A8MUP6 293 aa20.37■□□□□ 0.85
FOXN4-203ENST00000423960 APPP05067 770 aa20.37■□□□□ 0.85
FOXN4-203ENST00000423960 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
FOXN4-203ENST00000423960 PALD1Q9ULE6 856 aa20.37■□□□□ 0.85
FOXN4-203ENST00000423960 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
FOXN4-203ENST00000423960 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
FOXN4-203ENST00000423960 GIMAP6Q6P9H5 292 aa20.36■□□□□ 0.85
FOXN4-203ENST00000423960 TNS4Q8IZW8 715 aa20.36■□□□□ 0.85
FOXN4-203ENST00000423960 MCM9Q9NXL9 1143 aa20.36■□□□□ 0.85
FOXN4-203ENST00000423960 PI4KBQ9UBF8 816 aa20.36■□□□□ 0.85
FOXN4-203ENST00000423960 ATRNL1Q5VV63 1379 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 CCDC171Q6TFL3 1326 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 POLR3DP05423 398 aaPredicted RBP20.35■□□□□ 0.85
FOXN4-203ENST00000423960 HLA-DOAP06340 250 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 MAP2K2P36507 400 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 LBX1P52954 281 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 FKBP1BP68106 108 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 PRKG1Q13976 671 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 TTLL12Q14166 644 aaPredicted RBP20.35■□□□□ 0.85
FOXN4-203ENST00000423960 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 RGMBQ6NW40 437 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 MIGA2Q7L4E1 593 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 TTC6Q86TZ1 520 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 ZNF589Q86UQ0 364 aaPredicted RBP20.35■□□□□ 0.85
FOXN4-203ENST00000423960 ZIC5Q96T25 663 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
FOXN4-203ENST00000423960 COL2A1P02458 1487 aaPredicted RBP20.35■□□□□ 0.85
FOXN4-203ENST00000423960 MOB2Q70IA6 237 aa20.34■□□□□ 0.85
FOXN4-203ENST00000423960 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
FOXN4-203ENST00000423960 FOXP4Q8IVH2 680 aaPredicted RBP20.34■□□□□ 0.85
FOXN4-203ENST00000423960 IFNL3Q8IZI9 196 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms