RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 AK9Q5TCS8 1911 aa20.97■□□□□ 0.95
CHCHD3-202ENST00000423635 SLC5A1P13866 664 aa20.97■□□□□ 0.95
CHCHD3-202ENST00000423635 ELNP15502 786 aa20.97■□□□□ 0.95
CHCHD3-202ENST00000423635 PRDX5P30044 214 aa20.97■□□□□ 0.95
CHCHD3-202ENST00000423635 DEFB118Q96PH6 123 aa20.97■□□□□ 0.95
CHCHD3-202ENST00000423635 STAP2Q9UGK3 403 aa20.97■□□□□ 0.95
CHCHD3-202ENST00000423635 EYA2O00167 538 aa20.96■□□□□ 0.95
CHCHD3-202ENST00000423635 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
CHCHD3-202ENST00000423635 RFX5P48382 616 aaPredicted RBP20.96■□□□□ 0.95
CHCHD3-202ENST00000423635 LRCH3Q96II8 777 aa20.96■□□□□ 0.95
CHCHD3-202ENST00000423635 IDI2Q9BXS1 227 aa20.96■□□□□ 0.95
CHCHD3-202ENST00000423635 PICK1Q9NRD5 415 aa20.96■□□□□ 0.95
CHCHD3-202ENST00000423635 SALL1Q9NSC2 1324 aa20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 TNPO2O14787 897 aaKnown RBP20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 ZBTB22O15209 634 aa20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 ENTPD3O75355 529 aa20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 LDHBP07195 334 aaKnown RBP20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 BMP8BP34820 402 aa20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 GPR153Q6NV75 609 aa20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 USP44Q9H0E7 712 aa20.95■□□□□ 0.94
CHCHD3-202ENST00000423635 GADL1Q6ZQY3 521 aa20.94■□□□□ 0.94
CHCHD3-202ENST00000423635 PAWRQ96IZ0 340 aaKnown RBP20.94■□□□□ 0.94
CHCHD3-202ENST00000423635 GDF15Q99988 308 aa20.94■□□□□ 0.94
CHCHD3-202ENST00000423635 ATG9AQ7Z3C6 839 aa20.93■□□□□ 0.94
CHCHD3-202ENST00000423635 NECAB2Q7Z6G3 386 aa20.93■□□□□ 0.94
CHCHD3-202ENST00000423635 CTNND1O60716 968 aaKnown RBP20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 RGS3P49796 1198 aa20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 SH3BP5LQ7L8J4 393 aa20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 MRPL50Q8N5N7 158 aaKnown RBP20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 SMCR8Q8TEV9 937 aaPredicted RBP20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 COA7Q96BR5 231 aa20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 GNL3LQ9NVN8 582 aaKnown RBP20.92■□□□□ 0.94
CHCHD3-202ENST00000423635 SEMA3EO15041 775 aa20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 MNX1P50219 401 aaPredicted RBP20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 ANKLE1Q8NAG6 615 aa20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 FBXO3Q9UK99 471 aa20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 DENND2AQ9ULE3 1009 aa20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 LRRFIP2Q9Y608 721 aaKnown RBP20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 PTPRCP08575 1304 aa20.91■□□□□ 0.94
CHCHD3-202ENST00000423635 MYH13Q9UKX3 1938 aa20.9■□□□□ 0.94
CHCHD3-202ENST00000423635 FAM163AQ96GL9 167 aaPredicted RBP20.9■□□□□ 0.94
CHCHD3-202ENST00000423635 AGTPBP1Q9UPW5 1226 aa20.9■□□□□ 0.94
CHCHD3-202ENST00000423635 GAKO14976 1311 aa20.9■□□□□ 0.94
CHCHD3-202ENST00000423635 DDTLA6NHG4 134 aaPredicted RBP20.89■□□□□ 0.93
CHCHD3-202ENST00000423635 FAM110CQ1W6H9 321 aa20.89■□□□□ 0.93
CHCHD3-202ENST00000423635 ANKRD13CQ8N6S4 541 aa20.89■□□□□ 0.93
CHCHD3-202ENST00000423635 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.89■□□□□ 0.93
CHCHD3-202ENST00000423635 DOCK3Q8IZD9 2030 aa20.89■□□□□ 0.93
CHCHD3-202ENST00000423635 RFX7Q2KHR2 1363 aa20.89■□□□□ 0.93
CHCHD3-202ENST00000423635 CIAO1O76071 339 aa20.88■□□□□ 0.93
CHCHD3-202ENST00000423635 ATP2B3Q16720 1220 aa20.88■□□□□ 0.93
CHCHD3-202ENST00000423635 ZSCAN29Q8IWY8 852 aaPredicted RBP20.88■□□□□ 0.93
CHCHD3-202ENST00000423635 DIS3LQ8TF46 1054 aaKnown RBP20.88■□□□□ 0.93
CHCHD3-202ENST00000423635 PTPRFP10586 1907 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 TRIM75PA6NK02 468 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 TBC1D12O60347 775 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 LRIT3Q3SXY7 679 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 ZGPATQ8N5A5 531 aaKnown RBP20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 PNMA3Q9UL41 463 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 ALPK3Q96L96 1907 aa20.87■□□□□ 0.93
CHCHD3-202ENST00000423635 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 PHKA1P46020 1223 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 TREML2Q5T2D2 321 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 PROCA1Q8NCQ7 364 aaPredicted RBP20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 DDX4Q9NQI0 724 aaKnown RBP20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 GJD2Q9UKL4 321 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 TAOK2Q9UL54 1235 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 PHIPQ8WWQ0 1821 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 DOCK2Q92608 1830 aa20.86■□□□□ 0.93
CHCHD3-202ENST00000423635 RPTORQ8N122 1335 aa20.85■□□□□ 0.93
CHCHD3-202ENST00000423635 HMGCRP04035 888 aa20.85■□□□□ 0.93
CHCHD3-202ENST00000423635 GCLCP48506 637 aaPredicted RBP20.85■□□□□ 0.93
CHCHD3-202ENST00000423635 SLF2Q8IX21 1173 aa20.85■□□□□ 0.93
CHCHD3-202ENST00000423635 NBPF3Q9H094 633 aa20.85■□□□□ 0.93
CHCHD3-202ENST00000423635 NPM3O75607 178 aaKnown RBP20.84■□□□□ 0.93
CHCHD3-202ENST00000423635 C7orf61Q8IZ16 206 aa20.84■□□□□ 0.93
CHCHD3-202ENST00000423635 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
CHCHD3-202ENST00000423635 HMX1Q9NP08 348 aaPredicted RBP20.84■□□□□ 0.93
CHCHD3-202ENST00000423635 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.84■□□□□ 0.93
CHCHD3-202ENST00000423635 MYH2Q9UKX2 1941 aa20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 DOCK1Q14185 1865 aa20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 CCDC102BQ68D86 513 aa20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 CCDC84Q86UT8 332 aaPredicted RBP20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 OSBPL5Q9H0X9 879 aaPredicted RBP20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 ZMYND8Q9ULU4 1186 aaPredicted RBP20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 STXBP5LQ9Y2K9 1186 aa20.83■□□□□ 0.93
CHCHD3-202ENST00000423635 CUL9Q8IWT3 2517 aa20.83■□□□□ 0.92
CHCHD3-202ENST00000423635 PDS5AQ29RF7 1337 aaKnown RBP20.82■□□□□ 0.92
CHCHD3-202ENST00000423635 ZNF521Q96K83 1311 aa20.82■□□□□ 0.92
CHCHD3-202ENST00000423635 TBC1D2Q9BYX2 928 aa20.82■□□□□ 0.92
CHCHD3-202ENST00000423635 SIL1Q9H173 461 aa20.82■□□□□ 0.92
CHCHD3-202ENST00000423635 OGDHLQ9ULD0 1010 aa20.82■□□□□ 0.92
CHCHD3-202ENST00000423635 GPR75-ASB3A0A0A6YYF3 556 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 IL15P40933 162 aaPredicted RBP20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 BTDP43251 543 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 RHBDL3P58872 404 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 SPP2Q13103 211 aa20.81■□□□□ 0.92
CHCHD3-202ENST00000423635 PABPC4Q13310 644 aaKnown RBP eCLIP20.81■□□□□ 0.928e-7■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms