RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-213ENST00000421756 IGDCC4Q8TDY8 1250 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 NAT10Q9H0A0 1025 aaKnown RBP15.41■□□□□ 0.06
MCF2L-213ENST00000421756 POLR2DO15514 142 aaKnown RBP15.41■□□□□ 0.06
MCF2L-213ENST00000421756 CYP2D6P10635 497 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 TRIM22Q8IYM9 498 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 EEF2KMTQ96G04 330 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 SALL1Q9NSC2 1324 aa15.41■□□□□ 0.06
MCF2L-213ENST00000421756 ARFGEF2Q9Y6D5 1785 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
MCF2L-213ENST00000421756 SHC4Q6S5L8 630 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 PLA2G4DQ86XP0 818 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 ANKRD18AQ8IVF6 992 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 PLIN2Q99541 437 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 UBE3CQ15386 1083 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 LRRC8AQ8IWT6 810 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 USP17L12C9JPN9 530 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 USP17L21D6R901 530 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 U2AF2P26368 475 aaKnown RBP eCLIP15.4■□□□□ 0.062e-7■■□□□ 11.9
MCF2L-213ENST00000421756 SMYD4Q8IYR2 804 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-213ENST00000421756 DPF2Q92785 391 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 ZMYM6O95789 1325 aa15.4■□□□□ 0.06
MCF2L-213ENST00000421756 MAGEB6P1A0A0J9YX57 407 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 DYNC1I1O14576 645 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
MCF2L-213ENST00000421756 ZNF174Q15697 407 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 ZNF34Q8IZ26 560 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 DHX58Q96C10 678 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 UIMC1Q96RL1 719 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 ALS2Q96Q42 1657 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 MAPK8IP1Q9UQF2 711 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 KCPQ6ZWJ8 1503 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 CDKL5O76039 1030 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 PLEKHA8P1O95397 391 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 PRDX5P30044 214 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 ZNF710Q8N1W2 664 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-213ENST00000421756 PCDHA5Q9Y5H7 936 aa15.39■□□□□ 0.05
MCF2L-213ENST00000421756 CTAGE5O15320 804 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 PDIA4P13667 645 aaKnown RBP15.38■□□□□ 0.05
MCF2L-213ENST00000421756 PPARAQ07869 468 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 CCDC112Q8NEF3 446 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 CPVLQ9H3G5 476 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 TNKSO95271 1327 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 TCRBV5S4A2TA0A5A2 114 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 TMEM232C9JQI7 657 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 PES1O00541 588 aaKnown RBP15.38■□□□□ 0.05
MCF2L-213ENST00000421756 GNPATO15228 680 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 RAD21O60216 631 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 FANCLQ9NW38 375 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 KCNH3Q9ULD8 1083 aa15.38■□□□□ 0.05
MCF2L-213ENST00000421756 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-213ENST00000421756 PTPN14Q15678 1187 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-213ENST00000421756 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-213ENST00000421756 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
MCF2L-213ENST00000421756 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 CAVIN4Q5BKX8 364 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 TXNRD3Q86VQ6 643 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 GPIHBP1Q8IV16 184 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 ZNF654Q8IZM8 581 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 RASSF8Q8NHQ8 419 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 ANKIB1Q9P2G1 1089 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 SERTAD1Q9UHV2 236 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 SLC39A14Q15043 492 aa15.37■□□□□ 0.05
MCF2L-213ENST00000421756 UBASH3AP57075 661 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 TBC1D9BQ66K14 1250 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 BRAPQ7Z569 592 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 ZMYND15Q9H091 742 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 RASGRP4Q8TDF6 673 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 EPSTI1Q96J88 318 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 SAP30BPQ9UHR5 308 aaKnown RBP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 EARS2Q5JPH6 523 aaKnown RBP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 FOXP4Q8IVH2 680 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 CCAR2Q8N163 923 aaKnown RBP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 PDCL2Q8N4E4 241 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
MCF2L-213ENST00000421756 POLR3EQ9NVU0 708 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 MRC1P22897 1456 aa15.36■□□□□ 0.05
MCF2L-213ENST00000421756 FANCCQ00597 558 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 FANCBQ8NB91 859 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 COL18A1P39060 1754 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 TPM4P67936 248 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 PDE4BQ07343 736 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 DHX8Q14562 1220 aaKnown RBP15.35■□□□□ 0.05
MCF2L-213ENST00000421756 SYT10Q6XYQ8 523 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms