RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 WDR66Q8TBY9 1149 aa8.4□□□□□ -1.07
PMS1-208ENST00000421722 AGTPBP1Q9UPW5 1226 aa8.4□□□□□ -1.07
PMS1-208ENST00000421722 PHF20L1A8MW92 1017 aa8.39□□□□□ -1.07
PMS1-208ENST00000421722 GRM8O00222 908 aa8.39□□□□□ -1.07
PMS1-208ENST00000421722 ENTPD3O75355 529 aa8.39□□□□□ -1.07
PMS1-208ENST00000421722 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.07
PMS1-208ENST00000421722 GADL1Q6ZQY3 521 aa8.39□□□□□ -1.07
PMS1-208ENST00000421722 DOCK2Q92608 1830 aa8.39□□□□□ -1.07
PMS1-208ENST00000421722 COL6A1P12109 1028 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 PTPRAP18433 802 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 EPHA10Q5JZY3 1008 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 CDC42EP5Q6NZY7 148 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
PMS1-208ENST00000421722 GJD2Q9UKL4 321 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 ATRNL1Q5VV63 1379 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 DOCK1Q14185 1865 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 CTNND1O60716 968 aaKnown RBP8.38□□□□□ -1.07
PMS1-208ENST00000421722 FRAT2O75474 233 aaPredicted RBP8.38□□□□□ -1.07
PMS1-208ENST00000421722 MAP3K21Q5TCX8 1036 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 SMCR8Q8TEV9 937 aaPredicted RBP8.38□□□□□ -1.07
PMS1-208ENST00000421722 ZHX2Q9Y6X8 837 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 HTTP42858 3142 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 PHIPQ8WWQ0 1821 aa8.38□□□□□ -1.07
PMS1-208ENST00000421722 IDI2Q9BXS1 227 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 FAM198AQ9UFP1 575 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 LOC285556D6RIA3 1793 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 IFIT1P09914 478 aaKnown RBP8.37□□□□□ -1.07
PMS1-208ENST00000421722 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
PMS1-208ENST00000421722 SYN1P17600 705 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 VGLL2Q8N8G2 317 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 PUS3Q9BZE2 481 aaKnown RBP8.37□□□□□ -1.07
PMS1-208ENST00000421722 MORF4L1Q9UBU8 362 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 PTPRFP10586 1907 aa8.37□□□□□ -1.07
PMS1-208ENST00000421722 UTYO14607 1347 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 TMEM265A0A087WTH1 108 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 TBC1D12O60347 775 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 PDE8BO95263 885 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 METTL24Q5JXM2 366 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 SOCS4Q8WXH5 440 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 LBHD1Q9BQE6 289 aaPredicted RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 USP40Q9NVE5 1235 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 LRRFIP2Q9Y608 721 aaKnown RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 PFASO15067 1338 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 CEP290O15078 2479 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 RFX7Q2KHR2 1363 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 MAP4K4O95819 1239 aaPredicted RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 FGFR2P21802 821 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 RABL6Q3YEC7 729 aaPredicted RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 ANKRD13CQ8N6S4 541 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 MAFAQ8NHW3 353 aaPredicted RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 C9orf78Q9NZ63 289 aaPredicted RBP8.36□□□□□ -1.07
PMS1-208ENST00000421722 TAOK2Q9UL54 1235 aa8.36□□□□□ -1.07
PMS1-208ENST00000421722 PLXNB2O15031 1838 aa8.35□□□□□ -1.07
PMS1-208ENST00000421722 SEMA3EO15041 775 aa8.35□□□□□ -1.07
PMS1-208ENST00000421722 TCP10Q12799 353 aa8.35□□□□□ -1.07
PMS1-208ENST00000421722 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
PMS1-208ENST00000421722 SH3D19Q5HYK7 790 aa8.35□□□□□ -1.07
PMS1-208ENST00000421722 GTF3C2Q8WUA4 911 aaPredicted RBP8.35□□□□□ -1.07
PMS1-208ENST00000421722 OSBPL5Q9H0X9 879 aaPredicted RBP8.35□□□□□ -1.07
PMS1-208ENST00000421722 IQSEC3Q9UPP2 1182 aaPredicted RBP8.35□□□□□ -1.07
PMS1-208ENST00000421722 MAST2Q6P0Q8 1798 aa8.35□□□□□ -1.07
PMS1-208ENST00000421722 VAMP4O75379 141 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 SLC5A1P13866 664 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 SMAD3P84022 425 aaKnown RBP8.34□□□□□ -1.07
PMS1-208ENST00000421722 NFIAQ12857 509 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 LRRC26Q2I0M4 334 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 SLF2Q8IX21 1173 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 SUCLG2Q96I99 432 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 CDX2Q99626 313 aaPredicted RBP8.34□□□□□ -1.07
PMS1-208ENST00000421722 SEMA6BQ9H3T3 888 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 MYH13Q9UKX3 1938 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 AK9Q5TCS8 1911 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 ZGPATQ8N5A5 531 aaKnown RBP8.34□□□□□ -1.07
PMS1-208ENST00000421722 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 SRCIN1Q9C0H9 1055 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
PMS1-208ENST00000421722 GAKO14976 1311 aa8.34□□□□□ -1.07
PMS1-208ENST00000421722 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
PMS1-208ENST00000421722 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
PMS1-208ENST00000421722 ZKSCAN1P17029 563 aaPredicted RBP8.33□□□□□ -1.08
PMS1-208ENST00000421722 ZEB1P37275 1124 aaPredicted RBP8.33□□□□□ -1.08
PMS1-208ENST00000421722 RGS3P49796 1198 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 TRIB2Q92519 343 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 LPIN2Q92539 896 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 USP6NLQ92738 828 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
PMS1-208ENST00000421722 COL9A1P20849 921 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 MAPK4P31152 587 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
PMS1-208ENST00000421722 TRIM32Q13049 653 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 LRRC24Q50LG9 513 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 TREML2Q5T2D2 321 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 LHX8Q68G74 356 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 ZFPM1Q8IX07 1006 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 KAZALD1Q96I82 304 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms