RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 CCDC65Q8IXS2 484 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 GNA11P29992 359 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 ATP6V1AP38606 617 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 LINS1Q8NG48 757 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
CLCN4-203ENST00000421085 ZWINTO95229 277 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 BRD1O95696 1058 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
CLCN4-203ENST00000421085 MAGEA1P43355 309 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 BICC1Q9H694 974 aaKnown RBP13.79□□□□□ -0.2
CLCN4-203ENST00000421085 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
CLCN4-203ENST00000421085 CNNM4Q6P4Q7 775 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 GOLGA5Q8TBA6 731 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 TXNDC9O14530 226 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 MTMR3Q13615 1198 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 CEP128Q6ZU80 1094 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 CROCCP2Q86T23 111 aa13.79□□□□□ -0.2
CLCN4-203ENST00000421085 IDI1Q13907 227 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 POSTNQ15063 836 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 TRMT44Q8IYL2 757 aaKnown RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 CSRNP2Q9H175 543 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 UBL4BQ8N7F7 174 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 SPDYE3A6NKU9 549 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 HHATQ5VTY9 493 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 SDCCAG8Q86SQ7 713 aaPredicted RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 EIF4A2Q14240 407 aaKnown RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 B4E1Z4 1266 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 ARHGAP24Q8N264 748 aa13.78□□□□□ -0.2
CLCN4-203ENST00000421085 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.78□□□□□ -0.2
CLCN4-203ENST00000421085 SGSM2O43147 1006 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 DEXIO95424 95 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 KRT5P13647 590 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 GUCY2FP51841 1108 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 WHAMMP3Q1A5X7 153 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 LRRC8AQ8IWT6 810 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 BANK1Q8NDB2 785 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 TRIM68Q6AZZ1 485 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 PIK3AP1Q6ZUJ8 805 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 MGARPQ8TDB4 240 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 FAM227BQ96M60 508 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.2
CLCN4-203ENST00000421085 PPP1R21Q6ZMI0 780 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 WWC3Q9ULE0 1092 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 AGTPBP1Q9UPW5 1226 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 PIK3C2GO75747 1445 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 ATP1A2P50993 1020 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 PICALMQ13492 652 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 CCDC14Q49A88 953 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 PHLDB2Q86SQ0 1253 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 GBP7Q8N8V2 638 aaPredicted RBP13.77□□□□□ -0.21
CLCN4-203ENST00000421085 BCAS4Q8TDM0 211 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 KIF14Q15058 1648 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 GOLGA8KD6RF30 607 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
CLCN4-203ENST00000421085 DESI2Q9BSY9 194 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 ASIC3Q9UHC3 531 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
CLCN4-203ENST00000421085 PNOCQ13519 176 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-203ENST00000421085 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 GBP5Q96PP8 586 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 JAK2O60674 1132 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 GMNNO75496 209 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PPM1FP49593 454 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PSMD6Q15008 389 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 TRAF1Q13077 416 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 RPS6KA1Q15418 735 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 MUM1Q2TAK8 710 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
CLCN4-203ENST00000421085 PDE1CQ14123 709 aaPredicted RBP13.76□□□□□ -0.21
CLCN4-203ENST00000421085 DENND2CQ68D51 928 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms