RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 WRNIP1Q96S55 665 aa19.26■□□□□ 0.67
VAT1-202ENST00000420567 CSRNP1Q96S65 589 aa19.26■□□□□ 0.67
VAT1-202ENST00000420567 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
VAT1-202ENST00000420567 ELP3Q9H9T3 547 aa19.26■□□□□ 0.67
VAT1-202ENST00000420567 MAP4K4O95819 1239 aaPredicted RBP19.25■□□□□ 0.67
VAT1-202ENST00000420567 IGHDP01880 384 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 PDE6AP16499 860 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 PPP4CP60510 307 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 VGLL4Q14135 290 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 SLC9C2Q5TAH2 1124 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.25■□□□□ 0.67
VAT1-202ENST00000420567 BEGAINQ9BUH8 593 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 ZNF341Q9BYN7 854 aa19.25■□□□□ 0.67
VAT1-202ENST00000420567 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
VAT1-202ENST00000420567 ATRNL1Q5VV63 1379 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 DOCK2Q92608 1830 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 SLURP2P0DP57 97 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 PLCG2P16885 1265 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 SPRYD7Q5W111 196 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 MAPKAPK5Q8IW41 473 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 TGFBRAP1Q8WUH2 860 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 WNK4Q96J92 1243 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 OSBPL5Q9H0X9 879 aaPredicted RBP19.24■□□□□ 0.67
VAT1-202ENST00000420567 TSKSQ9UJT2 592 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 ZNF532Q9HCE3 1301 aa19.24■□□□□ 0.67
VAT1-202ENST00000420567 UNCXA6NJT0 531 aa19.23■□□□□ 0.67
VAT1-202ENST00000420567 SLFNL1Q499Z3 407 aa19.23■□□□□ 0.67
VAT1-202ENST00000420567 ZKSCAN4Q969J2 545 aaPredicted RBP19.23■□□□□ 0.67
VAT1-202ENST00000420567 CSADQ9Y600 493 aa19.23■□□□□ 0.67
VAT1-202ENST00000420567 FLT1P17948 1338 aa19.23■□□□□ 0.67
VAT1-202ENST00000420567 OTOFQ9HC10 1997 aa19.23■□□□□ 0.67
VAT1-202ENST00000420567 NPM3O75607 178 aaKnown RBP19.22■□□□□ 0.67
VAT1-202ENST00000420567 CHGBP05060 677 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 MX1P20591 662 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 INPP5BP32019 993 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 GJA5P36382 358 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 B4GALNT3Q6L9W6 998 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 OPTNQ96CV9 577 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 SNCAIPQ9Y6H5 919 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 MYO5AQ9Y4I1 1855 aaKnown RBP19.22■□□□□ 0.67
VAT1-202ENST00000420567 TTC41PQ6P2S7 1318 aa19.22■□□□□ 0.67
VAT1-202ENST00000420567 TCRBV5S4A2TA0A5A2 114 aa19.21■□□□□ 0.67
VAT1-202ENST00000420567 CTCFP49711 727 aaPredicted RBP19.21■□□□□ 0.67
VAT1-202ENST00000420567 TMED8Q6PL24 325 aaPredicted RBP19.21■□□□□ 0.67
VAT1-202ENST00000420567 SMC5Q8IY18 1101 aa19.21■□□□□ 0.67
VAT1-202ENST00000420567 RIOK1Q9BRS2 568 aaKnown RBP19.21■□□□□ 0.67
VAT1-202ENST00000420567 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.21■□□□□ 0.67
VAT1-202ENST00000420567 SALL3Q9BXA9 1300 aa19.21■□□□□ 0.67
VAT1-202ENST00000420567 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
VAT1-202ENST00000420567 FAM196BA6NMK8 535 aa19.2■□□□□ 0.66
VAT1-202ENST00000420567 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
VAT1-202ENST00000420567 HSPA8P11142 646 aaKnown RBP19.2■□□□□ 0.66
VAT1-202ENST00000420567 ADD2P35612 726 aa19.2■□□□□ 0.66
VAT1-202ENST00000420567 PI4K2BQ8TCG2 481 aa19.2■□□□□ 0.66
VAT1-202ENST00000420567 OTUD5Q96G74 571 aa19.2■□□□□ 0.66
VAT1-202ENST00000420567 LNPKQ9C0E8 428 aa19.2■□□□□ 0.66
VAT1-202ENST00000420567 SAP30BPQ9UHR5 308 aaKnown RBP19.2■□□□□ 0.66
VAT1-202ENST00000420567 COL2A1P02458 1487 aaPredicted RBP19.2■□□□□ 0.66
VAT1-202ENST00000420567 ERC2O15083 957 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 USP5P45974 858 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 LBX1P52954 281 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 SLC4A8Q2Y0W8 1093 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 CERS3Q8IU89 383 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 LCORLQ8N3X6 602 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 RNF186Q9NXI6 227 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 ZNF112Q9UJU3 913 aa19.19■□□□□ 0.66
VAT1-202ENST00000420567 SPDYE5A6NIY4 337 aa19.18■□□□□ 0.66
VAT1-202ENST00000420567 GLRX3O76003 335 aaKnown RBP19.18■□□□□ 0.66
VAT1-202ENST00000420567 SREBF2Q12772 1141 aa19.18■□□□□ 0.66
VAT1-202ENST00000420567 REM2Q8IYK8 340 aaPredicted RBP19.18■□□□□ 0.66
VAT1-202ENST00000420567 ARMT1Q9H993 441 aa19.18■□□□□ 0.66
VAT1-202ENST00000420567 PALD1Q9ULE6 856 aa19.18■□□□□ 0.66
VAT1-202ENST00000420567 MANSC4A6NHS7 340 aaPredicted RBP19.17■□□□□ 0.66
VAT1-202ENST00000420567 PHF20L1A8MW92 1017 aa19.17■□□□□ 0.66
VAT1-202ENST00000420567 CA12O43570 354 aa19.17■□□□□ 0.66
VAT1-202ENST00000420567 TRPA1O75762 1119 aa19.17■□□□□ 0.66
VAT1-202ENST00000420567 ZSCAN25Q6NSZ9 544 aa19.17■□□□□ 0.66
VAT1-202ENST00000420567 KBTBD3Q8NAB2 608 aa19.17■□□□□ 0.66
VAT1-202ENST00000420567 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.17■□□□□ 0.663e-6■□□□□ 9.8
VAT1-202ENST00000420567 MBD4O95243 580 aa19.16■□□□□ 0.66
VAT1-202ENST00000420567 MAP3K10Q02779 954 aa19.16■□□□□ 0.66
VAT1-202ENST00000420567 UBE3CQ15386 1083 aa19.16■□□□□ 0.66
VAT1-202ENST00000420567 NOL9Q5SY16 702 aaKnown RBP19.16■□□□□ 0.66
VAT1-202ENST00000420567 CHD1LQ86WJ1 897 aa19.16■□□□□ 0.66
VAT1-202ENST00000420567 ERO1BQ86YB8 467 aa19.16■□□□□ 0.66
VAT1-202ENST00000420567 DHX36Q9H2U1 1008 aaKnown RBP19.16■□□□□ 0.66
VAT1-202ENST00000420567 TM4SF4P48230 202 aa19.15■□□□□ 0.66
VAT1-202ENST00000420567 PDE1AP54750 535 aa19.15■□□□□ 0.66
VAT1-202ENST00000420567 NUCB1Q02818 461 aa19.15■□□□□ 0.66
VAT1-202ENST00000420567 CRNKL1Q9BZJ0 848 aaKnown RBP19.15■□□□□ 0.66
VAT1-202ENST00000420567 SAGE1Q9NXZ1 904 aa19.15■□□□□ 0.66
VAT1-202ENST00000420567 IGF2BP3O00425 579 aaKnown RBP eCLIP19.14■□□□□ 0.65
VAT1-202ENST00000420567 PRKAB2O43741 272 aa19.14■□□□□ 0.65
VAT1-202ENST00000420567 TBC1D12O60347 775 aa19.14■□□□□ 0.65
VAT1-202ENST00000420567 COL13A1Q5TAT6 717 aaPredicted RBP19.14■□□□□ 0.65
VAT1-202ENST00000420567 SCYL3Q8IZE3 742 aa19.14■□□□□ 0.65
VAT1-202ENST00000420567 SDR42E1Q8WUS8 393 aa19.14■□□□□ 0.65
VAT1-202ENST00000420567 FSD1Q9BTV5 496 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms