RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 HSPA2P54652 639 aa16.77■□□□□ 0.27
AP000550.1-201ENST00000420508 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.27
AP000550.1-201ENST00000420508 TSGA10Q9BZW7 698 aa16.77■□□□□ 0.27
AP000550.1-201ENST00000420508 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.27
AP000550.1-201ENST00000420508 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 CTAGE9A4FU28 777 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 TACC1O75410 805 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 ZNF202O95125 648 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 ABCC12Q96J65 1359 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 GALNT17Q6IS24 598 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 GOLGA1Q92805 767 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 ERO1AQ96HE7 468 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 DNAI1Q9UI46 699 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 ISM2Q6H9L7 571 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 ARFGAP3Q9NP61 516 aa16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
AP000550.1-201ENST00000420508 SHTN1A0MZ66 631 aa16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 GADD45BO75293 160 aaPredicted RBP16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 ZNF830Q96NB3 372 aaPredicted RBP16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 MPHOSPH6Q99547 160 aaKnown RBP16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 DDX12PQ92771 950 aa16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 NUP58Q9BVL2 599 aa16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 SH2D4AQ9H788 454 aa16.75■□□□□ 0.27
AP000550.1-201ENST00000420508 CRB1P82279 1406 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 CMA1P23946 247 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 LMBR1Q8WVP7 490 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 PDE6AP16499 860 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 TTC38Q5R3I4 469 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 GNPATO15228 680 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 UBE4AQ14139 1066 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 CNNM4Q6P4Q7 775 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 PLVAPQ9BX97 442 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 ITSN1Q15811 1721 aa16.74■□□□□ 0.27
AP000550.1-201ENST00000420508 DDAH1O94760 285 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 PDE8BO95263 885 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 TEX11Q8IYF3 940 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 TBC1D5Q92609 795 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 BAG1Q99933 345 aaPredicted RBP16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 CCNL1Q9UK58 526 aaPredicted RBP16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 PPFIA3O75145 1194 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 CCDC51Q96ER9 411 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 ALDH8A1Q9H2A2 487 aaPredicted RBP16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 CDC25BP30305 580 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 LUC7L2Q9Y383 392 aaKnown RBP16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 JAK2O60674 1132 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 PPARAQ07869 468 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 KIF5AQ12840 1032 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
AP000550.1-201ENST00000420508 ARHGAP6O43182 974 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 FANCCQ00597 558 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 TIGD1Q96MW7 591 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 SV2BQ7L1I2 683 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 WDR19Q8NEZ3 1342 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 H7C1W4 665 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 MICALCLQ6ZW33 695 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 MCM7P33993 719 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 MYRIPQ8NFW9 859 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
AP000550.1-201ENST00000420508 SPAG5Q96R06 1193 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 SELENOOQ9BVL4 669 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 KIAA1468Q9P260 1216 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 POSTNQ15063 836 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 CCDC65Q8IXS2 484 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 SPATA31A3Q5VYP0 1347 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 RPL13P26373 211 aaKnown RBP16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 VWA3BQ502W6 1294 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 OGFOD1Q8N543 542 aa16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 ZNF622Q969S3 477 aaKnown RBP eCLIP16.71■□□□□ 0.27
AP000550.1-201ENST00000420508 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.26
AP000550.1-201ENST00000420508 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.26
AP000550.1-201ENST00000420508 NOSTRINQ8IVI9 506 aa16.71■□□□□ 0.26
AP000550.1-201ENST00000420508 RASEFQ8IZ41 740 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms