RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SH3RF3Q8TEJ3 882 aaPredicted RBP15.17■□□□□ 0.02
LINC00642-201ENST00000419459 TEKT1Q969V4 418 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 SUGT1Q9Y2Z0 365 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 TAF6LQ9Y6J9 622 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 SLC4A4Q9Y6R1 1079 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 ECM29Q5VYK3 1845 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 GRIN3BO60391 1043 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 GMPSP49915 693 aaPredicted RBP15.16■□□□□ 0.02
LINC00642-201ENST00000419459 CACNB3P54284 484 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 GSTO1P78417 241 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 EPB41L4AQ9HCS5 686 aaPredicted RBP15.16■□□□□ 0.02
LINC00642-201ENST00000419459 PALD1Q9ULE6 856 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 GAKO14976 1311 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 SMIM22K7EJ46 135 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 USP17L8P0C7I0 530 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 TNIP1Q15025 636 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 UTP14CQ5TAP6 766 aaKnown RBP15.16■□□□□ 0.02
LINC00642-201ENST00000419459 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
LINC00642-201ENST00000419459 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 MAP4K1Q92918 833 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
LINC00642-201ENST00000419459 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
LINC00642-201ENST00000419459 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
LINC00642-201ENST00000419459 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
LINC00642-201ENST00000419459 EVX2Q03828 476 aa15.15■□□□□ 0.02
LINC00642-201ENST00000419459 CFAP100Q494V2 611 aa15.15■□□□□ 0.02
LINC00642-201ENST00000419459 TMEM63CQ9P1W3 806 aa15.15■□□□□ 0.02
LINC00642-201ENST00000419459 SCAF8Q9UPN6 1271 aaKnown RBP15.15■□□□□ 0.02
LINC00642-201ENST00000419459 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 GSG1L2A8MUP6 293 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 FGAP02671 866 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 LDHCP07864 332 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 RHBDL3P58872 404 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 HAND2P61296 217 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
LINC00642-201ENST00000419459 SAMD7Q7Z3H4 446 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 AGBL3Q8NEM8 1001 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 TGFBRAP1Q8WUH2 860 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 PRMT6Q96LA8 375 aaPredicted RBP15.14■□□□□ 0.01
LINC00642-201ENST00000419459 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
LINC00642-201ENST00000419459 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
LINC00642-201ENST00000419459 HHIPL2Q6UWX4 724 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 MYRIPQ8NFW9 859 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
LINC00642-201ENST00000419459 ZDHHC15Q96MV8 337 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
LINC00642-201ENST00000419459 ZDHHC9Q9Y397 364 aa15.14■□□□□ 0.01
LINC00642-201ENST00000419459 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 NAV1Q8NEY1 1877 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 BAG3O95817 575 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 PICALMQ13492 652 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 UVSSAQ2YD98 709 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 IFNL3Q8IZI9 196 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 GPC2Q8N158 579 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 DSCC1Q9BVC3 393 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
LINC00642-201ENST00000419459 SERPINA10Q9UK55 444 aa15.13■□□□□ 0.01
LINC00642-201ENST00000419459 CYP2D7A0A087X1C5 515 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 CLRN2A0PK11 232 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 SYCE3A1L190 88 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00642-201ENST00000419459 NFIAQ12857 509 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 PKP1Q13835 747 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 NECTIN1Q15223 517 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 NBPF9Q3BBW0 867 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 TBC1D10BQ4KMP7 808 aaPredicted RBP15.12■□□□□ 0.01
LINC00642-201ENST00000419459 CDC42EP5Q6NZY7 148 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 MAPKAPK5Q8IW41 473 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
LINC00642-201ENST00000419459 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 PATL2C9JE40 543 aaKnown RBP15.12■□□□□ 0.01
LINC00642-201ENST00000419459 CYP21A2P08686 494 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 TDO2P48775 406 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 TEX11Q8IYF3 940 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
LINC00642-201ENST00000419459 NAPBQ9H115 298 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 MYOZ2Q9NPC6 264 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
LINC00642-201ENST00000419459 USP40Q9NVE5 1235 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
LINC00642-201ENST00000419459 MYH1P12882 1939 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 WNT10BO00744 389 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 WDHD1O75717 1129 aaPredicted RBP15.11■□□□□ 0.01
LINC00642-201ENST00000419459 HSPA4P34932 840 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 EPS15P42566 896 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 USP5P45974 858 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 PPP4CP60510 307 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 TCP10Q12799 353 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 CREB3L3Q68CJ9 461 aa15.11■□□□□ 0.01
LINC00642-201ENST00000419459 INTS4Q96HW7 963 aaKnown RBP15.11■□□□□ 0.01
LINC00642-201ENST00000419459 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
LINC00642-201ENST00000419459 RBM27Q9P2N5 1060 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms