RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ADGRA1Q86SQ6 560 aa24.79■■□□□ 1.56
GTF3A-202ENST00000419181 OPTNQ96CV9 577 aa24.79■■□□□ 1.56
GTF3A-202ENST00000419181 LRRCC1Q9C099 1032 aa24.79■■□□□ 1.56
GTF3A-202ENST00000419181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.78■■□□□ 1.56
GTF3A-202ENST00000419181 ANTXR1Q9H6X2 564 aa24.78■■□□□ 1.56
GTF3A-202ENST00000419181 DCTPP1Q9H773 170 aa24.78■■□□□ 1.56
GTF3A-202ENST00000419181 PCDHB15Q9Y5E8 787 aa24.78■■□□□ 1.56
GTF3A-202ENST00000419181 SNCAIPQ9Y6H5 919 aa24.78■■□□□ 1.56
GTF3A-202ENST00000419181 CDK5RAP2Q96SN8 1893 aa24.78■■□□□ 1.56
GTF3A-202ENST00000419181 COL2A1P02458 1487 aaPredicted RBP24.77■■□□□ 1.56
GTF3A-202ENST00000419181 IDH1O75874 414 aaKnown RBP24.77■■□□□ 1.56
GTF3A-202ENST00000419181 INHBEP58166 350 aa24.77■■□□□ 1.56
GTF3A-202ENST00000419181 CNKSR2Q8WXI2 1034 aa24.77■■□□□ 1.56
GTF3A-202ENST00000419181 ZKSCAN4Q969J2 545 aaPredicted RBP24.77■■□□□ 1.56
GTF3A-202ENST00000419181 CRBNQ96SW2 442 aa24.77■■□□□ 1.56
GTF3A-202ENST00000419181 NOL10Q9BSC4 688 aaKnown RBP24.77■■□□□ 1.56
GTF3A-202ENST00000419181 ZNF112Q9UJU3 913 aa24.77■■□□□ 1.56
GTF3A-202ENST00000419181 FOCADQ5VW36 1801 aa24.77■■□□□ 1.56
GTF3A-202ENST00000419181 DDTLA6NHG4 134 aaPredicted RBP24.76■■□□□ 1.55
GTF3A-202ENST00000419181 SPDYE5A6NIY4 337 aa24.76■■□□□ 1.55
GTF3A-202ENST00000419181 BAG3O95817 575 aa24.76■■□□□ 1.55
GTF3A-202ENST00000419181 PPP4CP60510 307 aa24.76■■□□□ 1.55
GTF3A-202ENST00000419181 SH3RF3Q8TEJ3 882 aaPredicted RBP24.76■■□□□ 1.55
GTF3A-202ENST00000419181 BCL11AQ9H165 835 aa24.76■■□□□ 1.55
GTF3A-202ENST00000419181 AATFQ9NY61 560 aaKnown RBP eCLIP24.76■■□□□ 1.55
GTF3A-202ENST00000419181 INPP5BP32019 993 aa24.75■■□□□ 1.55
GTF3A-202ENST00000419181 ZSCAN29Q8IWY8 852 aaPredicted RBP24.75■■□□□ 1.55
GTF3A-202ENST00000419181 TEX11Q8IYF3 940 aa24.75■■□□□ 1.55
GTF3A-202ENST00000419181 SMARCA5O60264 1052 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-202ENST00000419181 PLCG2P16885 1265 aa24.74■■□□□ 1.55
GTF3A-202ENST00000419181 MAP3K10Q02779 954 aa24.74■■□□□ 1.55
GTF3A-202ENST00000419181 MAP3K12Q12852 859 aa24.74■■□□□ 1.55
GTF3A-202ENST00000419181 TMED8Q6PL24 325 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-202ENST00000419181 ERO1BQ86YB8 467 aa24.74■■□□□ 1.55
GTF3A-202ENST00000419181 IFNL1Q8IU54 200 aa24.74■■□□□ 1.55
GTF3A-202ENST00000419181 OTUD5Q96G74 571 aa24.74■■□□□ 1.55
GTF3A-202ENST00000419181 OSBPL5Q9H0X9 879 aaPredicted RBP24.74■■□□□ 1.55
GTF3A-202ENST00000419181 TESPA1A2RU30 521 aaPredicted RBP24.73■■□□□ 1.55
GTF3A-202ENST00000419181 IGF2BP3O00425 579 aaKnown RBP eCLIP24.73■■□□□ 1.55
GTF3A-202ENST00000419181 CYP7A1P22680 504 aa24.73■■□□□ 1.55
GTF3A-202ENST00000419181 TTF1Q15361 905 aaPredicted RBP24.73■■□□□ 1.55
GTF3A-202ENST00000419181 MAGEB6Q8N7X4 407 aa24.73■■□□□ 1.55
GTF3A-202ENST00000419181 MS4A4AQ96JQ5 239 aa24.73■■□□□ 1.55
GTF3A-202ENST00000419181 CFHR5Q9BXR6 569 aa24.73■■□□□ 1.55
GTF3A-202ENST00000419181 TBC1D8O95759 1140 aa24.72■■□□□ 1.55
GTF3A-202ENST00000419181 ALDH1A1P00352 501 aa24.72■■□□□ 1.55
GTF3A-202ENST00000419181 ATP5JP18859 108 aa24.72■■□□□ 1.55
GTF3A-202ENST00000419181 NOL9Q5SY16 702 aaKnown RBP24.72■■□□□ 1.55
GTF3A-202ENST00000419181 PHF20L1A8MW92 1017 aa24.71■■□□□ 1.55
GTF3A-202ENST00000419181 ABHD8Q96I13 439 aa24.71■■□□□ 1.55
GTF3A-202ENST00000419181 DNAJC2Q99543 621 aaKnown RBP24.71■■□□□ 1.55
GTF3A-202ENST00000419181 GOLIM4O00461 696 aa24.7■■□□□ 1.54
GTF3A-202ENST00000419181 GTF2A2P52657 109 aa24.7■■□□□ 1.54
GTF3A-202ENST00000419181 PPIL2Q13356 520 aa24.7■■□□□ 1.54
GTF3A-202ENST00000419181 PTPN18Q99952 460 aa24.7■■□□□ 1.54
GTF3A-202ENST00000419181 SIPA1L1O43166 1804 aa24.7■■□□□ 1.54
GTF3A-202ENST00000419181 TBC1D12O60347 775 aa24.69■■□□□ 1.54
GTF3A-202ENST00000419181 SLURP2P0DP57 97 aa24.69■■□□□ 1.54
GTF3A-202ENST00000419181 DYNLL1P63167 89 aaKnown RBP24.69■■□□□ 1.54
GTF3A-202ENST00000419181 PPATQ06203 517 aa24.69■■□□□ 1.54
GTF3A-202ENST00000419181 CERS3Q8IU89 383 aa24.69■■□□□ 1.54
GTF3A-202ENST00000419181 EDC3Q96F86 508 aaKnown RBP24.69■■□□□ 1.54
GTF3A-202ENST00000419181 BOLA2Q9H3K6 86 aa24.69■■□□□ 1.54
GTF3A-202ENST00000419181 DOCK1Q14185 1865 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 FLT1P17948 1338 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 IRF6O14896 467 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 DGKZQ13574 1117 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 NOM1Q5C9Z4 860 aaKnown RBP24.68■■□□□ 1.54
GTF3A-202ENST00000419181 MIGA1Q8NAN2 632 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 TGFBRAP1Q8WUH2 860 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 BRI3BPQ8WY22 251 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 HAUS7Q99871 368 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 PAG1Q9NWQ8 432 aa24.68■■□□□ 1.54
GTF3A-202ENST00000419181 CCL15-CCL14A0A0B4J2E2 113 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 PDE6AP16499 860 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 CCL15Q16663 113 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 SLC9C2Q5TAH2 1124 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 OTUD7BQ6GQQ9 843 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 MAPKAPK5Q8IW41 473 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 MCOLN1Q9GZU1 580 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 R3HDMLQ9H3Y0 253 aa24.67■■□□□ 1.54
GTF3A-202ENST00000419181 SNAPC2Q13487 334 aa24.66■■□□□ 1.54
GTF3A-202ENST00000419181 SCYL3Q8IZE3 742 aa24.66■■□□□ 1.54
GTF3A-202ENST00000419181 DHX36Q9H2U1 1008 aaKnown RBP24.66■■□□□ 1.54
GTF3A-202ENST00000419181 ECHDC1Q9NTX5 307 aa24.66■■□□□ 1.54
GTF3A-202ENST00000419181 MYH7P12883 1935 aa24.65■■□□□ 1.54
GTF3A-202ENST00000419181 GPR25O00155 361 aa24.65■■□□□ 1.54
GTF3A-202ENST00000419181 CTNND1O60716 968 aaKnown RBP24.65■■□□□ 1.54
GTF3A-202ENST00000419181 CETPP11597 493 aa24.65■■□□□ 1.54
GTF3A-202ENST00000419181 AAMPQ13685 434 aa24.65■■□□□ 1.54
GTF3A-202ENST00000419181 ZNF296Q8WUU4 475 aaPredicted RBP24.65■■□□□ 1.54
GTF3A-202ENST00000419181 RIOK1Q9BRS2 568 aaKnown RBP24.65■■□□□ 1.54
GTF3A-202ENST00000419181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.65■■□□□ 1.54
GTF3A-202ENST00000419181 MYH1P12882 1939 aa24.65■■□□□ 1.54
GTF3A-202ENST00000419181 TCRBV5S4A2TA0A5A2 114 aa24.64■■□□□ 1.54
GTF3A-202ENST00000419181 FAM196BA6NMK8 535 aa24.64■■□□□ 1.54
GTF3A-202ENST00000419181 PI4KBQ9UBF8 816 aa24.64■■□□□ 1.54
GTF3A-202ENST00000419181 HERC5Q9UII4 1024 aaKnown RBP24.64■■□□□ 1.54
GTF3A-202ENST00000419181 KCNH4Q9UQ05 1017 aa24.64■■□□□ 1.54
GTF3A-202ENST00000419181 ZNF532Q9HCE3 1301 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms