RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 F13A1P00488 732 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 ITGB2P05107 769 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 GARTP22102 1010 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 RACK1P63244 317 aaKnown RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 RPL6Q02878 288 aaKnown RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 RAD51AP2Q09MP3 1159 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 ZC3H12AQ5D1E8 599 aaKnown RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 WIPI1Q5MNZ9 446 aaPredicted RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 FBXL19Q6PCT2 694 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 BNC2Q6ZN30 1099 aaPredicted RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 HDXQ7Z353 690 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 KIAA0825Q8IV33 1275 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 C2CD4AQ8NCU7 369 aaPredicted RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 ZNF296Q8WUU4 475 aaPredicted RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 GATAD2BQ8WXI9 593 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 UTP4Q969X6 686 aaKnown RBP4.29□□□□□ -1.72
VPS41-206ENST00000418457 FANCD2OSQ96PS1 177 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 SPON2Q9BUD6 331 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 TGIF2Q9GZN2 237 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 ATXN3LQ9H3M9 355 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 CCSER2Q9H7U1 834 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 KCNQ5Q9NR82 932 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 CRIM1Q9NZV1 1036 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 ACTL7BQ9Y614 415 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 SNCAIPQ9Y6H5 919 aa4.29□□□□□ -1.72
VPS41-206ENST00000418457 CILPO75339 1184 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 ASPAP45381 313 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 USP11P51784 963 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 ERVK-24P63145 666 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 INPP5AQ14642 412 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 LRFN4Q6PJG9 635 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.28□□□□□ -1.72
VPS41-206ENST00000418457 FAM196AQ6ZSG2 479 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.28□□□□□ -1.72
VPS41-206ENST00000418457 C12orf40Q86WS4 652 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 TP53INP1Q96A56 240 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 PLPPR2Q96GM1 343 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 SSBP4Q9BWG4 385 aaPredicted RBP4.28□□□□□ -1.72
VPS41-206ENST00000418457 YIPF2Q9BWQ6 316 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 PIDD1Q9HB75 910 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 PICK1Q9NRD5 415 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 HIF3AQ9Y2N7 669 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 CSADQ9Y600 493 aa4.28□□□□□ -1.72
VPS41-206ENST00000418457 ROBO2Q9HCK4 1378 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.27□□□□□ -1.73
VPS41-206ENST00000418457 PRAMEF27A3QJZ7 478 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 FAM221AA4D161 298 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 MSTNO14793 375 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 TLR3O15455 904 aaKnown RBP4.27□□□□□ -1.73
VPS41-206ENST00000418457 GREM1O60565 184 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 BMP3P12645 472 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 RXRBP28702 533 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 CDK8P49336 464 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 MPP2Q14168 576 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 TTLL4Q14679 1199 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 GPAT2Q6NUI2 795 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 ARMC10Q8N2F6 343 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 RNF214Q8ND24 703 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 FBXO27Q8NI29 283 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 MYRFLQ96LU7 910 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 NT5C1AQ9BXI3 368 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 KCNF1Q9H3M0 494 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 ACBD3Q9H3P7 528 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 GSX1Q9H4S2 264 aaPredicted RBP4.27□□□□□ -1.73
VPS41-206ENST00000418457 DISC1Q9NRI5 854 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 TPSG1Q9NRR2 321 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 FAM105AQ9NUU6 356 aa4.27□□□□□ -1.73
VPS41-206ENST00000418457 GFRA2O00451 464 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 FANCGO15287 622 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 DHX15O43143 795 aaKnown RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 RNGTTO60942 597 aaKnown RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 PROCP04070 461 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 HCLS1P14317 486 aaPredicted RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 RAB6AP20340 208 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 MAP4P27816 1152 aaKnown RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 APOBRQ0VD83 1088 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 PAK2Q13177 524 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 DOC2BQ14184 412 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 CWF19L2Q2TBE0 894 aaKnown RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 SGO2Q562F6 1265 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 PPM1JQ5JR12 505 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 CDPF1Q6NVV7 123 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 CYFIP1Q7L576 1253 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 REC114Q7Z4M0 266 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 FAM20CQ8IXL6 584 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 FBLIM1Q8WUP2 373 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 NKD1Q969G9 470 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 EAF1Q96JC9 268 aaPredicted RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 SPOCK3Q9BQ16 436 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 LRRC3Q9BY71 257 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 ACSS3Q9H6R3 686 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 SSU72Q9NP77 194 aaKnown RBP4.26□□□□□ -1.73
VPS41-206ENST00000418457 UBP1Q9NZI7 540 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 TACC3Q9Y6A5 838 aa4.26□□□□□ -1.73
VPS41-206ENST00000418457 IGHA1P01876 353 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 NEFMP07197 916 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 CRKP46108 304 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 ETF1P62495 437 aaKnown RBP4.25□□□□□ -1.73
VPS41-206ENST00000418457 RING1Q06587 406 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 PDE4BQ07343 736 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms