RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 LDLRAD1Q5T700 205 aa21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 SH3BP5LQ7L8J4 393 aa21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 CDAN1Q8IWY9 1227 aa21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 TGFBRAP1Q8WUH2 860 aa21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 PUS7LQ9H0K6 701 aaKnown RBP21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DHX36Q9H2U1 1008 aaKnown RBP21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ABT1Q9ULW3 272 aaKnown RBP21.13■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 MYH7P12883 1935 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 USP2O75604 605 aaPredicted RBP21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 CHGBP05060 677 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 HUNKP57058 714 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 PICALMQ13492 652 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DEFB115Q30KQ5 88 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 SLFNL1Q499Z3 407 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 TTC22Q5TAA0 569 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DNAJC5GQ8N7S2 189 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 OSBP2Q969R2 916 aa21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 CRNKL1Q9BZJ0 848 aaKnown RBP21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 MKRN1Q9UHC7 482 aaKnown RBP21.12■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 FLT1P17948 1338 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DDTLA6NHG4 134 aaPredicted RBP21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 TBC1D12O60347 775 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 HTRA3P83110 453 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ZMYM1Q5SVZ6 1142 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DCAF15Q66K64 600 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 LCORLQ8N3X6 602 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 AIDAQ96BJ3 306 aa21.11■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 TRIM6-TRIM34B2RNG4 842 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 MBD4O95243 580 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 IREB2P48200 963 aaKnown RBP21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 MAPKAPK5Q8IW41 473 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 KLRG1Q96E93 195 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 CSRNP1Q96S65 589 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 STRBPQ96SI9 672 aaKnown RBP21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ATP8A2Q9NTI2 1148 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ANGEL1Q9UNK9 670 aaKnown RBP21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 CEP350Q5VT06 3117 aa21.1■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 UBE2Q2LH0YL09 131 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 USP5P45974 858 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 TTLL12Q14166 644 aaPredicted RBP21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 RGMBQ6NW40 437 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 METTL16Q86W50 562 aaKnown RBP21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ZSCAN29Q8IWY8 852 aaPredicted RBP21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 RILPL2Q969X0 211 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ARMT1Q9H993 441 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 PI4KBQ9UBF8 816 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ZNF112Q9UJU3 913 aa21.09■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 GSPT1P15170 499 aaKnown RBP21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 GNAT2P19087 354 aa21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 MOB2Q70IA6 237 aa21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 FOXP4Q8IVH2 680 aaPredicted RBP21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ZNF341Q9BYN7 854 aa21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 HELLSQ9NRZ9 838 aa21.08■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 FOCADQ5VW36 1801 aa21.08■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 HIP1O00291 1037 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 ECE1P42892 770 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 MAP3K9P80192 1104 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 PRKG1Q13976 671 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 ANKRD13AQ8IZ07 590 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 CCDC102AQ96A19 550 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 TAOK2Q9UL54 1235 aa21.07■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 GPAA1O43292 621 aa21.06■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SDSP20132 328 aa21.06■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 HERC5Q9UII4 1024 aaKnown RBP21.06■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 CDK5RAP2Q96SN8 1893 aa21.06■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 TTC6Q86TZ1 520 aa21.05■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SDR42E1Q8WUS8 393 aa21.05■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 EHD4Q9H223 541 aa21.05■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 PALD1Q9ULE6 856 aa21.05■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 FZD1Q9UP38 647 aa21.05■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SLC4A4Q9Y6R1 1079 aa21.05■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 PHF20L1A8MW92 1017 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 M0R2C6 588 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 PRKAB2O43741 272 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 HLA-DOAP06340 250 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 VEGFBP49765 207 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 ZNF157P51786 506 aaPredicted RBP21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 MCMDC2Q4G0Z9 681 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 CAPNS2Q96L46 248 aa21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SEC62Q99442 399 aaKnown RBP21.04■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 FAM155AB1AL88 458 aaPredicted RBP21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 PATL2C9JE40 543 aaKnown RBP21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SLC10A3P09131 477 aa21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 CYP4F22Q6NT55 531 aa21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 DDRGK1Q96HY6 314 aa21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 WRNIP1Q96S55 665 aa21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 WDR33Q9C0J8 1336 aaKnown RBP21.03■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 GSG1L2A8MUP6 293 aa21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 MAP2K2P36507 400 aa21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 NOL9Q5SY16 702 aaKnown RBP21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SLC10A4Q96EP9 437 aa21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 MCM9Q9NXL9 1143 aa21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 SAP30BPQ9UHR5 308 aaKnown RBP21.02■□□□□ 0.96
COMMD3-BMI1-201ENST00000417470 AK9Q5TCS8 1911 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms